Diversity Analysis of Genes Coding for Phytoene Synthase And Their Corresponding RNA And Proteins

National Bureau of Plant Genetic Resources, New Delhi

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S.N.

Protein ID

Species

SignalP

(Signal peptide)

PTS1

Peroxisomal targeting

 

 

ChloroP

(cTP)

Chloroplast transit peptide

MitoProt

(Cleavage site)

Presence of mitochondrial targeting signal

1

NP_197225.1

Arabidopsis thaliana

No

Not targeted

Yes

Not predictable

2

NP_001154715.1

Arabidopsis thaliana

No

Not targeted

Yes

Not predictable

3

NP_001031895.1

Arabidopsis thaliana

No

Not targeted

Yes

Not predictable

4

XP_002327564.1

Populus trichocarpa

No

Not targeted

No

Not predictable

5

XP_002304008.1

Populus trichocarpa

No

Not targeted

No

Not predictable

6

XP_002306754.1

Populus trichocarpa

No

Not targeted

Yes

37

7

XP_002532975.1

Ricinus communis

No

Not targeted

No

36

8

XP_002283193.1

Vitis vinifera

No

Not targeted

Yes

51

9

NP_001058647.1

Oryza sativa Japonica Group

No

Not targeted

No

Not predictable

10

NP_001063892.1

Oryza sativa Japonica Group

No

Not targeted

No

14

11

NP_001067325.1

Oryza sativa Japonica Group

No

Not targeted

No

-

12

XP_002462810.1

Sorghum bicolor

No

Not targeted

Yes

59

13

XP_002442578.1

Sorghum bicolor

No

Not targeted

Yes

65

14

XP_002297643.1

Populus trichocarpa

No

Not targeted

No

-

15

XP_002302132.1

Populus trichocarpa

No

Not targeted

No

Not predictable

Doveloped By: Vijay Kumar Sharma, RA, NBPGR, New Delhi-110012