Diversity Analysis of Genes Coding for Phytoene Synthase And Their Corresponding RNA And Proteins

National Bureau of Plant Genetic Resources, New Delhi

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S.N.

Protein ID

Species

No. of sumoylation sites

position

Motif

Type

1

NP_197225.1

Arabidopsis thaliana

1

114

LDVKKPQ

TypeII: Non consensus

2

NP_001154715.1

Arabidopsis thaliana

1

114

LDVKKPQ

TypeII: Non consensus

3

NP_001031895.1

Arabidopsis thaliana

1

114

LDVKKPQ

TypeII: Non consensus

4

XP_002327564.1

Populus trichocarpa

2

113

 

434

ALVKKEL

 

PLAKT

TypeI: Ψ-K-X-E

 

TypeII: Non consensus

5

XP_002304008.1

Populus trichocarpa

0

 

 

 

6

XP_002306754.1

Populus trichocarpa

2

 

85

 

 

253

 

REQKKER

 

 

PESKAST

TypeII: Non consensus

 

TypeII: Non consensus

7

XP_002532975.1

Ricinus communis

2

47

 

 

427

GREKKDK

 

 

SLTKA

TypeII: Non consensus

 

TypeII: Non consensus

 

8

XP_002283193.1

Vitis vinifera

1

78

REQKRDR

TypeII: Non consensus

 

9

NP_001058647.1

Oryza sativa Japonica Group

1

420

NSQK

TypeII: Non consensus

 

10

NP_001063892.1

Oryza sativa Japonica Group

0

 

 

 

11

NP_001067325.1

Oryza sativa Japonica Group

0

 

 

 

12

XP_002462810.1

Sorghum bicolor

0

 

 

 

13

XP_002442578.1

Sorghum bicolor

2

97

 

 

98

EEEKKEE

 

 

EEEKKEE

TypeII: Non consensus

 

TypeII: Non consensus

 

14

XP_002297643.1

Populus trichocarpa

0

 

 

 

15

XP_002302132.1

Populus trichocarpa

1

152

PESKAST

TypeII: Non consensus

 

Doveloped By: Vijay Kumar Sharma, RA, NBPGR, New Delhi-110012