Diversity Analysis of Genes Coding for Phytoene Synthase And Their Corresponding RNA And Proteins

National Bureau of Plant Genetic Resources, New Delhi

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S.N.

Protein ID

Species

Number of transmembrane helices

 

Transmembrane helices:

 

1

NP_197225.1

Arabidopsis thaliana

3

172-189 281-300 313-330

 

2

NP_001154715.1

Arabidopsis thaliana

0

0

3

NP_001031895.1

Arabidopsis thaliana

0

0

4

XP_002327564.1

Populus trichocarpa

3

182-199 291-313 322-339

 

5

XP_002304008.1

Populus trichocarpa

0

0

6

XP_002306754.1

Populus trichocarpa

3

153-170 262-284 293-310

 

7

XP_002532975.1

Ricinus communis

1

46-65

 

8

XP_002283193.1

Vitis vinifera

0

0

9

NP_001058647.1

Oryza sativa Japonica Group

0

0

10

NP_001063892.1

Oryza sativa Japonica Group

1

249-270

 

11

NP_001067325.1

Oryza sativa Japonica Group

2

221-243 252-269

 

12

XP_002462810.1

Sorghum bicolor

2

299-321 330-348

 

13

XP_002442578.1

Sorghum bicolor

2

270-292 301-318

 

14

XP_002297643.1

Populus trichocarpa

2

161-178 187-204

 

15

XP_002302132.1

Populus trichocarpa

3

52-69 161-183 192-209

 

Doveloped By: Vijay Kumar Sharma, RA, NBPGR, New Delhi-110012