Databases


Genomic/DNA-based Database

Sl. No. Name of the Database Detail
1. PiPeMicroDb: Pigeonpea MicroSatellite Database http://webapp.cabgrid.res.in/pigeonpea
2. TomSatDB: Tomato MicroSatellite International Database http://webapp.cabgrid.res.in/tomsatdb/
3. SBMDb: Sugarbeet MicroSatellite Database http://webapp.cabgrid.res.in/sbmdb/
4. TaSSRDb: Wheat Microsatellite Database http://webtom.cabgrid.res.in/wheatssr/
5. BanSatDB: Banana Microsatellite Database http://webtom.cabgrid.res.in/bansatdb/
6. GinMicrosatDb: A Genome-Wide Microsatellite Markers Database for Sesame (Sesamum indicum L.) http://backwin.cabgrid.res.in:8080/Gingelly7
7. VigSatDb: Vigna sp. Insilico and validated microsatellite database http://webtom.cabgrid.res.in/vigna_ssr/
8. Millet SSR Database http://webtom.cabgrid.res.in/millet_ssr_db/
9. BrassicaSatDB: Brassica Microsatellite Database http://webapp.cabgrid.res.in/brassica/
10. PlantSSRDb: Unifying easy FDRs and SSR-FDMs Database http://webapp.cabgrid.res.in/plantssr/
11. BlackP2MSATdb: Black Pepper Polymorphic Microsatellite Database http://backlin.cabgrid.res.in/bp2ssrdb/
12. MgSatDB:Marigold Microsatellite Marker database http://backlin.cabgrid.res.in/mgsatdb
13. Bp2SSRdb: Black pepper polymorphic SSR database http://backlin.cabgrid.res.in/bp2ssrdb/
14. MushroomMgR1: Mushroom SSR Database http://backlin.cabgrid.res.in/mushroomMgR1/
15. FungSatDB: Microsatellite extraction platform for fungal species http://webtom.cabgrid.res.in/fungsatdb/
16. BuffSatDb: Buffalo Microsatellite Database http://webapp.cabgrid.res.in/buffsatdb/
17. GoSatDb: Goat Microstellite Database http://webapp.cabgrid.res.in/goat
18. MiSNPDb: A Web Genomic Resource of Mango http://webtom.cabgrid.res.in/mangosnps/
19. BpVarDB: Black pepper variants database http://backlin.cabgrid.res.in/bpvardb/
20. CBSIR: Clusterbean SNPs and INDELs Repository http://webapp.cabgrid.res.in/clb_ce/rep.php
21. SNPRBb: Trait specific SNP Resources of Bubalus bubalis http://webapp.cabgrid.res.in/snprbb/
22. EqSNPDb: Equine SNP marker database http://webtom.cabgrid.res.in/eqsnpdb/

RNA/Transcriptome-based Database

Sl. No. Name of the Database Detail
1. CnTDB: Transcriptomic Database and Web Portal for Coconut http://webtom.cabgrid.res.in/cntdb/
2. VmTDb: Vignamungo Transcriptome Database http://webtom.cabgrid.res.in/vmtdb/
3. WDRoTdb: Wheat Drought Root Transcriptome Database http://webtom.cabgrid.res.in/wdrotdb/
4. SCMVTDb: Small Cardamom Mosaic Virus Transcriptome Data http://webtom.cabgrid.res.in/scmvtdb/
5. BPDRTDb: Black Pepper Drought Transcriptome Database http://webtom.cabgrid.res.in/bpdrtdb
6. xxviii. SmTMVD: Transcriptome based Mosaic Virus Database http://webtom.cabgrid.res.in/smtmvd/
7. PmdTDb: Pearl Millet Drought Trancriptome Database http://webtom.cabgrid.res.in/pmdtdb/
8. ParkRoxTDB: Tree Bean (Parkia roxburghii) Transcriptome Database http://backlin.cabgrid.res.in/parkroxtdb/
9. SmCarTDB: Small cardamom transcriptome database http://webtom.cabgrid.res.in/smtcrd/
10. OYVMVTDb: Okra (Abelmoschus esculentus) Yellow Vein Mosaic Virus Transcriptome Database http://backlin.cabgrid.res.in/oyvmvtdb
11. CsExSLDb: Transcriptome based Cucumis sativus Extended Shelf Life Database http://backlin.cabgrid.res.in/csexsldb/
12. Castor Transcriptome Database http://webtom.cabgrid.res.in/castdb/
13. PotTransDB: Potato Transcriptome Database http://backlin.cabgrid.res.in/PotatoTransDB/
14. CsDTDb: Transcriptome based Cucumis sativus Database for Drought http://backlin.cabgrid.res.in/CsDTDb/
15. CsHTDb: Transcriptome based Cucumis sativus Database for Heat http://backlin.cabgrid.res.in/CsHTDb/
16. WDLeTdb: Wheat Drought Leaf Transcriptome Database http://backlin.cabgrid.res.in/wdletdb/
17. STDbCr: Soybean Transcriptome Database for Charcoal rot http://backlin.cabgrid.res.in/stdbcr/
18. CbLncRNAdb: Cluster Bean LncRNA Database http://cabgrid.res.in/cblncrnadb/
19. xli. PMDlncRDB: Pearl Millet Drought long non-coding RNA Database http://webtom.cabgrid.res.in/pmdlncrdb/
20. LncR-CsExSLDb:LncRNA based Cucumis sativus Extended Shelf Life Database http://webtom.cabgrid.res.in/lncrcsexsldb/
21. i. BPncRDB: Black pepper non-coding RNA database http://backlin.cabgrid.res.in/BPncRDB
22. Cb-DElncRNA: Cluster bean lncRNA Database http://backlin.cabgrid.res.in/Cb-DElncRNA/
23. TpGBNVDb: Thrips palmi transcriptome database in response to groundnut bud necrosis virus http://backlin.cabgrid.res.in/tpgbnvdb/
24. BtChiLCVDb: Bemisia tabaci Asia II 1 transcriptome database in response to chilli leaf curl virus http://backlin.cabgrid.res.in/btchilcvdb/
25. KadakExpress: Comprehensive database of gene expression in Kadaknath chicken (Gallus gallus) https://cabgrid.res.in/kadakexpress/
26. BSCM2TDb: Buffalo Subclinical Mastitis Methylome-Transcriptome Database http://webtom.cabgrid.res.in/BSCM2TDb/
27. LrSATDb: A transcriptome database of seasonality associated genes in carp fish, Labeo rohita (rohu) http://webtom.cabgrid.res.in/lrsatdb/
28. CCncRNAdb: A database of lncRNA and cirRNA for Common carp http://backlin.cabgrid.res.in/ccncrnadb
29. BuffExDb: Web-based tissue-specific gene expression resource for breeding and conservation programs in Bubalus bubalis http://ec2-43-204-144-167.ap-south-1.compute.amazonaws.com/buffex/

Other Databases

Sl. No. Name of the Database Detail
1. Levidb: genomics of Viruses: Legume Crops http://webtom.cabgrid.res.in/levidb/
2. BGIS: Buffalo Genome Information System http://cabgrid.res.in:8080/bgis/homepage/
3. HProtDB: Halophile Protein Database http://webapp.cabgrid.res.in/protein/
4. Microsatellite based Horse Breed Prediction http://backlin.cabgrid.res.in/horse/
5. Splicestore: The Splicesite Collection of Rice Genome http://bioinformatics.iasri.res.in/edil/
6. BGIS: Buffalo Genome Information System http://bioinformatics.iasri.res.in/ABL/Splicestore.html
7. StressMicrobesInfo: Microbial Database http://webapp.cabgrid.res.in/Stressmicrobs/stressdb.html
8. Database on core collection of germplasm of rice http://bioinformatics.iasri.res.in/bam/
9. OGR: The Onion Genomic Resource http://webtom.cabgrid.res.in/ogr/
10. WBMSTDb: Water Buffalo Mastitis Database http://webtom.cabgrid.res.in/wbmstdb/
11. TiGeR: Tilletia indica genomic resource http://backlin.cabgrid.res.in/tiger/
12. TeaHapMap: Tea Hap (Genomic Resource) http://webtom.cabgrid.res.in/teahapmap/
13. CerealESTDb: http://cabgrid.res.in/CerealESTDb
14. EqCNVdb: Equine CNVs database http://backlin.cabgrid.res.in/eqcnvdb/
15. BufAMPdb: a database for buffalo species specific AMPs and non-AMPs http://backlin.cabgrid.res.in/buffampdb/
16. BPepAMPdb: Whole genome based BlackPepper antimicrobial peptides database http://backlin.cabgrid.res.in/bpepampdb/
17. AVR-AgDb: Antiviral Agricultural Database http://backlin.cabgrid.res.in/avragdb/
18. NutTraitDatabase http://backlin.cabgrid.res.in/nutritrait/
19. BgDb: Bitter Gourd Resource Database http://backlin.cabgrid.res.in/bgdb/
20. BPCNVDb: A web genomic resource, the Black pepper CNV database http://backlin.cabgrid.res.in/bpcnvdb/

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