Dr. Dinesh Kumar
Dr. Dinesh Kumar
Principal Scientist
dinesh.kumar@icar.gov.in, dineshkumarbhu@gmail.com
Citations and H index

Area of Interest

  • Bioinformatics and Genomics of Agricultural and Related Germplasm
  • IPR and Technology Management Strategy: in National and International Perspective
  • Working Culture and System Improvement of my organisation ICAR along with team management

Important Projects

  • Mainstreaming rice landraces diversity in varietal development through genome wide association studies: A model for large-scale utilization of gene bank collections of rice (Project ERP Code: 1012315) - DBT Funded Project

  • Germplasm Characterization and Trait Discovery in Wheat using Genomics Approaches and its Integration for Improving Climate Resilience, Productivity and Nutritional quality (Project ERP Code: 1012316) - DBT Funded Project

  • Molecular markers for improving reproduction of cattle and buffaloes - Funded by Bill and Melinda Gates Foundation (BMGF).

  • An integrative transciptomics and DNA methylomics approach to understand the dynamic features of biotic stress responses associated with mastitis in buffalos (Collaboration with ICAR-Central Institute for Research on Buffalo, Hisar)- Funded by ICAR

  • Improving the usability of buffalo spermatozoa by sperm surface remodeling and immune acceptance in female reproductive tract-Funded by NASF, ICAR, New Delhi

  • ICAR Network Project on Functional Genomics and Genetic Modification (Earlier ICAR-Network Project on Transgenic Crops)-Funded by ICAR

  • Deciphering genetic variation in the carbohydrate metabolism of farmed rohu families (Collaboration with ICAR-Central Institute of Freshwater Aquaculture, Bhubaneshwar)- Funded by ICAR

  • Computational approach for genomic resource improvement and precision phenotyping of less explored yield traits in wheat (Collaboration with ICAR-Indian Institute of Wheat and Barley Research, Karnal)- Funded by ICAR

  • Computational and experimental biology approaches for delineation of selected secondary metabolyte pathways and antimicrobial peptides (AMPs) in major spices (Collaboration with ICAR-Indian Institute of Spices Research, Kohzikode, Kerala)- Funded by ICAR

  • Development of web server for phenotype and genotype analysis for cattle breeding management (Collaboration with ICAR-Central Institute for Research on Cattle, Meerut)-Inter-Institutional Project

  • Completed:

  • Genomic data analysis to elucidate the regulatory network and candidate genes underlying cytoplasmic male sterility in pigeonpea (Collaboration with ICAR-Indian Institute of Pulses Research, Kanpur) - Funded by ICAR

  • Whole Genome sequencing and development of allied genomic research in two commercially important Fish - Labeo rohita and Clarias batrachus- DBT Funded Project (January 2014 to March 2018)

  • Whole genome based SNP mining and development of breed signatures for dairy and dual-purpose indigenous cattle- DBT Funded Project (July 2014 to December 2017)

  • Genomic data analysis for identification of economically important markers and viral diagnostics in pulses (Collaboration with ICAR-Indian Institute of Pulses Research, Kanpur) - Funded by ICAR (June 2015 to September 2017)

  • Molecular and computational approach to delineate metabolic pathways for better carbohydrate utilization in Labeo spp. (Collaboration with ICAR-Central Institute of Freshwater Aquaculture, Bhubaneshwar)- Funded by ICAR (June 2015 to September 2017)

  • Computational approach for harnessing genome information and its integration with wheat phenome for efficient varietal development (Collaboration with ICAR-Indian Institute of Wheat and Barley Research, Karnal)- Funded by ICAR (June 2015 to September 2017)

  • Mining and validation of candidate gene markers and screening on antimicrobial peptides of black pepper and small cardamom (Collaboration with ICAR-Indian Institute of Spices Research, Kohzikode, Kerala)- Funded by ICAR (June 2015 to September 2017)

  • Establishment of National Agricultural Bioinformatics Grid in ICAR (April, 2013 to June 2014)-Funded By NAIP, ICAR

Copyright Received

Sl. No. Authors Title Year Copyright Registration Number / Country
1. Sarika, Vasu Arora, M.A. Iquebal, Anil Rai, and Dinesh Kumar PipeMicroDb: Pigeonpea Microsatellite Database http://webapp.cabgrid.res.in/pigeonpea/ 2018 SW-10687/2018 India
2. Pradeep Sharma, Sonia Sheoran, Bharti Aneja, Sarika Jaiswal, G.P. Singh, Anil Rai, Vasu Arora, Dinesh Kumar, M.A. Iquebal, U.B. Angadi, Nishu Raghav, R.S. Khokar, Deepender Kumar, Ratan Tiwari TaSSRDb: Triticum aestivum SSR Database http://webtom.cabgrid.res.in/wheatssr/ 2018 SW-11115/2018 India
3. M.A. Iquebal, Sarika, Vasu Arora, Nidhi Verma, Anil Rai and Dinesh Kumar TomSatDb: Tomato Microsatellite Database http://webapp.cabgrid.res.in/tomsatdb/ 2018 SW-10689/2018 India
4. Sarika Jaiswal, M.A. Iquebal, Vasu Arora, Sonia Sheoran, P. Sharma P, U.B. Angadi, R. Singh, R. Tiwari, G.P. Singh, A. Rai, Dinesh Kumar TamiRPred: Putative miRNA Discovery and its Target Identification tool for Wheat (Triticum aestivum L.) http://webtom.cabgrid.res.in/tamirpred/index.php 2018 SW-10685/2018 India
5. C.N. Mishra, Sarika Jaiswal, N. Kumar, V. Tiwari, U.B. Angadi, A. Gupta, D. Kumar, S. Sheoran, N. Raghava, D. Kumar, A. Rai, S. Paul, M.A Iquebal, G.P. Singh, P. Sharma, R. Singh, R. Tiwari VISTa: Variety Identification System for Triticum aestivum (Wheat) software http://webtom.cabgrid.res.in/vista/ 2018 SW-10795/2018 India
6. Sarika, Vasu Arora, Dinesh Kumar, Anil Rai, M.A. Iquebal Buffsatdb: Buffalo Microsatellite Database http://webapp.cabgrid.res.in/buffsatdb/ 2018 SW-10802/2018 India
7. Sarika, M.A. Iquebal, Vasu Arora, Anil Rai and Dinesh Kumar Antimicrobial Prediction server for cattle: http://webapp.cabgrid.res.in/amp/ 2018 SW-10688/2018 India
8. Sarika Jaiswal, Samar Fatma, Vasu Arora, M.A. Iquebal, S. Nandi, J.K. Sundaray, J. Jayasanker, Anil Rai, Dinesh Kumar Antimicrobial Prediction server for Fish http://webapp.cabgrid.res.in/fishamp/ 2018 SW-10838/2018 India
9. Sarika, Vasu Arora, M. A. Iquebal, Anil Rai, Dinesh Kumar GoSatDb: Goat Microsatellite Database http://webapp.cabgrid.res.in/goat/ 2019 SW-12452/2019 India
10. M. A. Iquebal, Sandeep Kumar Verma, Rahul Singh Jasrotia, Sarika, U. B. Angadi, Anil Rai, Dinesh Kumar CnTDB: Coconut Transcriptome Database http://webtom.cabgrid.res.in/cntdb/ 2019 SW-12454/2019 India
11. Anil Rai, Dinesh Kumar, Sarika, M. A. Iquebal, Vasu Arora BrassicaSatDb: Brassica Microsatellite Database http://webapp.cabgrid.res.in/brassica/ 2022 SW-15347/2022 India
12. Anil Rai, Dinesh Kumar, Sarika, M. A. Iquebal, Vasu Arora SmCarTDB: Small Cardamom Transcriptome database http://webtom.cabgrid.res.in/smtcrd/ 2022 SW-15348/2022 India
                                                                             Copyright Applied
1. Vasu Arora, Sarika, M. A. Iquebal, Neera Kapoor, Samar Fatma, Anil Rai, Dinesh Kumar BanSatDB: Banana Microsatellite Database with primer generation tool http://webtom.cabgrid.res.in/bansatdb 2019 5458/2019-CO/SW
2. M. A. Iquebal, Sarika, U. B. Angadi, Samar Fatma, Yasmin Fatima, Anil Rai, Dinesh Kumar, Abhishek Bohra, K.R. Soren, Mohd. Akram, N.P. Singh Levidb: Genomics of Virus in Legume Crops http://webtom.cabgrid.res.in/levidb/ 2019 5463/2019-CO/SW
3. Shantanu Shukla, M. A. Iquebal, Sarika, U. B. Angadi, Samar Fatma, Neeraj Kumar, Rahul Singh Jasrotia, Yasmin Fatima, Anil Rai, Dinesh Kumar OGR: The Onion Genomic Resource http://webtom.cabgrid.res.in/ogr/ 2019 5461/2019-CO/SW

Foreign Visit

  • IOWA State University of Science & Technology, USA in the year 2003-04
  • IOWA State University of Science & Technology, USA in the year 2007-08

Awards and Honours

  • DBT Overseasland term Fellowship
  • CSIR/UGC (NET Fellowship) in Ph.D.
  • GATE Fellowship
  • DBT Natioanal Fellowship in PG

Important Publications

  • Sharma, N.K., Singh, P., Saha, B., Bhardwaj, A., Iquebal M.A., Pal, Y., Nayan, V., Jaiswal, S., Giri, S.K., Legha, R.A., Bhattacharya, TK, Kumar, D., Rai, A. (2023) Genome wide copy number variations in Bhutia equine breed using SNP genotyping data. Indian Journal of Animal Sciences, 93(8):802-805 Genetics iconpdf

  • Das, J., Kumar, B., Saha, B., Jaiswal, S., Iquebal M.A., Angadi, UB, Kumar, D. (2023) Genome-wide identification and characterization of tissue specific long non-coding RNAs and circular RNAs in Common carp (Cyprinus carpio L.). Frontiers in Genetics iconpdf

  • Joshi, B., Singh, S., Tiwari, G.J., Kumar, H., Boopathi, NM, Jaiswal, S., Adhikari, D., Kumar, D., Sawant, S.V., Iquebal, M.A., Jena, S.N. (2023) Genome-wide association study (GWAS) of yield-related traits uncovers the novel genomic regions and candidate genes in Indian upland cotton (Gossypium hirsutm L.). Frontiers in Plant Science iconpdf

  • Das, P., Chandra, T., Negi, A., Jaiswal, S., Iquebal, M.A., Rai, A. and Kumar, D. (2023) A comprehensive review on genomic resources in medicinally and industrially important major spices for future breeding programs: status, utility and challenges. Current Research in Food Science iconpdf

  • Chandra, T., Jaiswal, S., Iquebal, Mir Asif, Singh, R., Gautam, R.K., Rai, A., Anil, Kumar, D. (2023) Revitalizing miRNAs mediated beneficial agronomic traits improvement in rice. Plant Physiology and Biochemistry Journal. iconpdf

  • Bhardwaj, A., Tandon, G., Pal, Y., Sharma, N.K., Nayan, V., Soni, S., Iquebal, M. A., Jaiswal, S., Legha, R.A., Legha, T., TR, Bhattacharya, T.K., Kumar, D., Rai, A., Tripathi, B.N. (2023) Genome-wide SNP based genomic diversity and runs of homozygosity for selection signatures in Equine breeds. MDPI Genes (ISSN: 2073-4425)iconpdf

  • Rasal, K.D., Dixit, S., Swain, P.P, Siriyappagouder, P., Kumar, R., Iquebal, M.A., Vasam, M., Debbarma, J., Jaiswal, S., Angadi, U.B., Rai, A., Kumar, D., Sundaray, J.K. (2023) Identification of host-specific skin-mucus and gut microbiota in snakehead murrel (Channa striata) (Bloch, 1793) using metagenomics approach. Journal of Applied Biology & Biotechnology. 2023 (DOI: https://doi.org/10.7324/JABB.2023.11508 iconpdf

  • A., Bulbul, Haque, Md. A., Iquebal, M.A., Jaiswal, S., Angadi, U.B.,Kumar, D. , Rai, A. (2023) DeepAProt: Deep learning based abiotic stress protein sequence classification and identification tool in cereals. Frontiers in Plant Science iconpdf

  • Jaiswal, S., Rasal, K. D., Chandra, T., Prabha, R., Iquebal, M. A., Rai, A., & Kumar, D. (2022). Proteomics in fish health and aquaculture productivity management: Status and future perspectives. Aquaculture, 739159. iconpdf

  • Navathe, S., Pandey, A.K., Chand, R., Mishra, V.K., Kumar, D. , Sarika, Iquebal, M.A., Govindan, V., Joshi, A.K. (2022) New genomic regions for resistance to spot blotch and terminal heat in an interspecific population of Triticum aestivum and T. spelta. Plants iconpdf

  • Jaiswal, S., Aneja, B., Jaisri J., Pandey, B., Chhokar, R.S., Gill, S.C., Ahlawat, O.P., Kumar, A., Angadi, U.B., Rai, A., Tiwari, R., Iquebal, M.A., Kumar, D. (2022) Unveiling wheat microbiome under varied agricultural field conditions. Microbiology Spectrum iconpdf

  • Kumar, B., Kumar, A., Jaiswal, S., Iquebal, M.A., Angadi, U.B., Tomar, R.S., Rai, A., Kumar, D. (2022) Genome-wide identification of long non-coding RNAs in pearlmillet (Pennisetum glaucum (L.)) genotype subjected to drought stress. MDPI Agronomy (2073-4395) iconpdf

  • Jain, P., Singh, A., Iquebal, M.A., Jaiswal, S., Kumar, Sundeep, Rai, A., Kumar, D.(2022) Genome-wide analysis and evolutionary perspective of cytokinin dehydrogenase gene family in wheat (Triticum aestivum L.). Frontiers in Genetics.iconpdf

  • Dey, S.S., Sharma, P., Das M., Anilabha, Jaiswal, S., Behera, T.K., Kumari, K., Boopalakrishnan, G., Iquebal, M.A., Bhattacharya, R.C., Rai, A., Kumar, D.(2022) Genome wide identification of lncRNAs and circRNAs having regulatory role in fruit shelf life in health crop cucumber (Cucumis sativus L.). Frontiers in Plant Science iconpdf

  • Iquebal, M.A., Jagannadham, J., Jaiswal, S., Prabha, R., Rai, Anil and Kumar, D. (2022). Potential use of microbial community genomes in various dimensions of agriculture productivity and its management: A review. Frontiers in Microbiology iconpdf

  • Negi, A., Singh, K., Jaiswal, S., George, J. K., Angadi, U.B., Iquebal, M.A., Umadevi P., Rai, A., Kumar, D. (2022) Rapid genome wide location specific polymorphic SSR markers in black pepper genotypes by GBS approach. Frontiers in Plant Science iconpdf

  • Paul, S., Duhan, J.S., Jaiswal, S., Angadi, U.B., Sharma, R., Raghav, N., Gupta, O.P., Sheoran, S., Sharma, P., Singh, R., Rai, A., Singh, G.P., Kumar, D., Iquebal, M.A., Tiwari, R. (2022) RNA-Seq analysis of developing grains of wheat to intrigue into the complex molecular mechanism of the heat stress response. Frontiers in Plant Science. iconpdf

  • Khan, A., Singh, K., Jaiswal, S., Raza, M., Jasrotia, R.S., Kumar, A., Gurjar, A.K.S, Kumari, J., Nayan, V., Iquebal, M.A., Angadi, U.B., Rai, A., Datta, T.K. and Kumar, D.. (2022) Whole-Genome-Based Web Genomic Resource for Water Buffalo (Bubalus bubalis). Front. Genet. 13:809741. iconpdf

  • Dhillon, M. K., Jaba, J., Mishra, P., Iquebal, M.A., Jaiswal, S., Tanwar, A.K., Bharat kumar, N., Arora, N., Mishra, S.P., Prasad, G.S., Hasan, F., Rai, A., Kumar, D., and Sharma, H.C (2022) Whole genome sequencing of spotted stem borer, Chilo partellus reveals multiple genes encoding enzymes for detoxification of insecticides. Functional and Integrative Genomics. iconpdf

  • Nayan, V., Singh, K., Iquebal, M.A., Jaiswal, S., Bhardwaj, A., Singh, C., Bhatia, T., Kumar, S., Singh, R., Swaroop, M.N., Kumar, R., Phulia, S.K., Bharadwaj, A., Kumar, D., Datta, T.K., Rai, A. (2022) Genome-wide DNA methylation and its effect on gene expression during subclinical mastitis in water buffalo. Frontiers in Genetics iconpdf

  • Gaur, A., Jindal, Y., Tiwari, R., Kumar, D., Kaushik, D., Singh, J., Narwal, S., Jaiswal, S., Iquebal, M.A., Angadi, U.B., Singh, G., Rai, A., Singh, G.P., Sheoran, S. (2022) GWAS to identify novel QTNs for WSC accumulation in wheat peduncle under different water regimes. Frontiers in Plant Science. iconpdf

  • Sheoran, S., Jaiswal, S., Raghav, N., Sharma, R., Sabhyata, Gaur, A., Jaisri J., Tandon, G., Singh, S., Sharma, P., Singh, R., Iquebal, M.A., Angadi, U.B., Gupta, A., Singh, G., Singh, G.P., Rai, A., Kumar, D., Tiwari, R. (2022) Genome-Wide Association Study and Post-genome-Wide Association Study Analysis for Spike Fertility and Yield Related Traits in Bread Wheat. Frontiers in Plant Science. iconpdf

  • Iquebal, M.A., Mishra, P., Maurya, R., Jaiswal, S., Rai, A. and Kumar, D. (2021) Centenary of Soil and Air borne wheat Karnal bunt disease research: A Review. MDPI Biology, 10(11), 1152. iconpdf

  • Iquebal, M.A., Passari, Ajit Kumar, Jaisri J, Ahmad, Farzana, Deka, Pubajyoti, Jaiswal, S., Rai, A., Kumar, D., Singh, B.P., (2021). Microbiome of Pukzing Cave in India shows high antimicrobial activity against plant and animal pathogens. Genomics iconpdf

  • Kumar A., Mishra D.C., Angadi U.B., Yadav R., Rai A., Kumar, D. Inhibition Potencies of Phytochemicals Derived from Sesame Against SARS-CoV-2 Main Protease: A Molecular Docking and Simulation Study. iconpdf

  • Sarwalia, P., Raza, M., Soni, A., Dubey, P. , Kumar, R., Kumaresan, A., Onteru, S. K., Singh, K., Iquebal, M. A., Jaiswal, S., Pal, A., Kumar, D.,, Datta, T.K. (2021) Establishment of the repertoire for placentome associated microRNA and their appearance in blood plasma could identify early establishment of pregnancy in buffalo (Bubalus bubalis). Frontiers in Cell and Developmental Biology, iconpdf

  • Jaiswal, S., Jaisri J., Kumari, J., Iquebal, M.A., Gujjar, A.K.S., Nayan, V., Angadi, U.B., Kumar, S., Kumar, R., Datta, T.K., Rai, A., Kumar, D. (2021). Genome wide prediction, mapping and development of genomic resources of Mastitis associated genes in Buffalo. Frontiers in Veterinary Sciences. iconpdf

  • George, J.K., Shelvy, S., Fayad, M., Umadevi P, Angadi, U.B., Iquebal, M. A., Jaiswal, S., Rai, A., Kumar, D. (2021). Denovo transcriptome sequencing assisted identification of terpene synthases from black pepper (Piper nigrum) berry. Physiology and Molecular Biology of Plantsiconpdf

  • George, J.K., Shelvy, S., Fayad, A.M., Angadi, U.B.,. Iquebal, M.A.,Jaiswal, S., Rai, A., Kumar, D. De novo transcriptome sequencing assisted identification of terpene synthases from black pepper (Piper nigrum) berry. Physiol Mol Biol Plants (2021). iconpdf

  • Iquebal, M.A., Jaiswal S., Singh, B.P., Prabha, R., Jasrotia, R.S., Angadi, U.B., Singh, D.P., Gupta, V., Rai, A. and Kumar, D. (2021). Fungal genomic resources for strain identification and diversity analysis of 1900 fungal species. Journal of Fungi. iconpdf

  • Negi A, George Kokkat J, Jasrotia R.S., Madhavan S., Jaiswal S., Angadi U.B., Iquebal M.A., Kalathil Palliyarakkal M., Palaniyandi U., Rai A., Kumar D. Drought responsiveness in black pepper (Piper nigrum L.): Genes associated and development of a web-genomic resource. Physiol Plant. iconpdf

  • Rasal,Kiran D.,Iquebal, Mir Asif, Dixit, Sangita, Vasam, Manohar,Jaiswal,Sarika, Sahoo, Lakshman, Jagannadham, Jaisri, Nandi, Samiran, Mahapatra, Kanta Das, Rasal, Avinash, Udit, Uday Kumar, Meher, Prem Kumar, Murmu, Khuntia, Angadi, UB,Rai, Anil, Sundaray, Jitendra Kumar and Kumar, Dinesh (2020). Revealing global transcriptional plasticity and modulation in metabolic pathways in liver of genetically improved carp, Jayanti rohu, Labeo rohita fed with high carbohydrate regime. International Journal of Molecular Sciences.iconpdf

  • Kumar, D, Kumar, A, Chhokar, V, Gangwar, O.P., Bhardwaj,S.C, Sivasamy M, Prasad,Sai, Sheoran,S.V, Singh, Sonia, Sharma, Rajender, Iquebal ,M A, Jaiswal,Sarika, Angadi, U.B., Singh,Gyanendra,Rai Anil ,Singh, G.P., Kumar, Dinesh ,and Tiwari, Ratan (2020) Genome-wide association studies in diverse spring wheat panel for Stripe, Stem and Leaf rust resistance. Frontiers in Plant Science, 11, Article number 748.iconpdf

  • Das, P., Joshi, C.G., Kushwaha, B., Kumar, D., Sahoo, L., Das, S.P., Bit, A., Shah, T.M., Hinsu, A.T., Patel, N., Patnaik, S., Agarwal, S., Pandey, M., Srivastava, S., Meher, P.K., Jayasankar, P, Koringa, P.G., Nagpure, N.S., Kumar, R., Singh, M., Iquebal, M.A., Jaiswal, S., Kumar, N., Raza, M., Mahapatra, K.D. and Jena, J.K. (2019). De novo assembly and genome-wide SNP discovery in rohu carp, Labeo rohita. Frontiers in Geneticsiconpdf

  • Deepender Kumar, Vinod Chhokar, Sonia Sheoran, Rajender Singh, Pradeep Sharma, Sarika Jaiswal, M. A. Iquebal, Akanksha Jaiswar, J. Jaisri, U. B. Angadi, Anil Rai, G. P. Singh, Kumar, Dinesh, Ratan Tiwari, Characterization of genetic diversity and population structure in wheat using array based SNP markers, Mol Biol Rep (2019).iconpdf

  • Mir Asif Iquebal, Pradeep Sharma, Rahul Singh Jasrotia, Sarika Jaiswal, Amandeep Kaur, Monika Saroha, U. B. Angadi, Sonia Sheoran, Rajender Singh, G. P. Singh, Anil Rai, Ratan Tiwari & Dinesh Kumar. RNAseq analysis reveals drought-responsive molecular pathways with candidate genes and putative molecular markers in root tissue of wheat, Scientific Reports volume 9, Article number: 13917 (2019) iconpdf

  • Ali, Abid, Kumar, Rakesh, Iquebal, Mir Asif, Jaiswal, Sarika, Kumar, Dinesh and khan, Asad (2018). Role of conserved residues in catalytic activity of NDM-1: an approach of site directed mutagenesis and molecular dynamics. Physical Chemistry Chemical Physics-a Journal of Royal Society of Chemistry. iconpdf

  • Rasal, Kiran D., Iquebal, Mir Asif,Jaiswal, Sarika, Dixit, Sangita, Vasam, Manohar, Nandi, Samiran, Raza, Mustafa, Sahoo, Lakshman, Angadi, UB, Rai Anil, Kumar, Dinesh, and Sundaray, Jitendra Kumar Sundaray (2019). Liver specific microRNAs identification in farmed carp, Labeo bata (Hamilton, 1822) fed with starch diet using high-throughput sequencing. Marine Biotechnology iconpdf

  • Rasal, Kiran D., Iquebal, Mir Asif, Pandey, Amrendra, Behera, Parmeswari, Jaiswal, Sarika, Vasam, Manohar, Dixti, Sangita, Raza, Mustafa, Sahoo, L., Nandi, Samiran, Angadi, UB, Rai Anil, Kumar, Dinesh Nagpure, Naresh, Chaudhari, Aparna and Sundaray, Jitendra Kumar (2019) Revealing liver specific microRNAs linked with carbohydrate metabolism of farmed carp, Labeo rohita (Hamilton, 1822). Genomics. iconpdf

  • Jasrotia, Rahul Singh, Yadav, Pramod Kumar, Iquebal, Mir Asif, Bhatt, S.B., Arora, Vasu, Angadi, U.B., Tomar Rukam Singh, Jaiswal, Sarika, Rai, Anil, Kumar, Dinesh (2019). VigSatDB: Genome wide microsatellite DNA marker database of three species of Vigna for germplasm characterization and improvement. Database: The Journal of Biological Databases and Curation.iconpdf

  • Sheoran, Sonia,Jaiswal Sarika, Kumar, Deepender, Raghav, Nishu, Sharma, Ruchika, Pawar, Sushma, Paul, Surinder, Iquebal, M.A., Jaiswar, Akanksha, Sharma, Pradeep, Singh, Rajender, Singh, CB Gupta, Arun, Kumar, Neeraj,Angadi, U.B.,Rai, Anil, Singh, G.P., Kumar, Dinesh, Tiwari, Ratan (2018). Uncovering genomic regions associated with 36 agro-morphological traits in Indian spring wheat using GWAS. Frontiers in Plant Science.iconpdf

  • Jaiswal, Sarika, Iquebal, M.A., Arora, Vasu, Angadi, U.B., Khokar, R.S., Sharma, Pradeep, Sheoran, Sonia, Singh, G.P., Rai, Anil, Kumar, Tiwari, Ratan, Dinesh (2019). Development of species specific putative miRNA and its target prediction tool in wheat (Triticum aestivum L.). Scientific Reports, DOI : 10.1038/s41598-019-40333-y iconpdf

  • Singh, Rajender, Iquebal, MA, Mishra, CN, Jaiswal, Sarika, Kumar, Deepender, Raghav, Nishu, Paul, Surinder, Sheoran, Sonia, Sharma, Pradeep, Gupta, Arun, Tiwari, Vinod, Angadi, UB,Kumar, Neeraj, Rai, Anil, Singh, GP, Kumar, Dinesh and Tiwari, Ratan (2019) Development of model web-server for crop variety identification using throughput SNP genotyping data. Scientific Reports (Nature Group of Journal). iconpdf

  • Das, Ritwika, Arora, Vasu, Jaiswal, Sarika, Iquebal, MA, Angadi, UB, Singh, Rakesh, Shil, Sandip, Rai, Anil and Kumar Dinesh (2018). PolyMorphPredict: Web server for rapid polymorphic SSR locus discovery from whole genome and transcriptome data. Frontiers in Plant Sciences.

  • Jaiswal, Sarika, Jadhav, Pravin V., Jasrotia, Rahul Singh, Kale, Prashant B., Kad, Snehal K., Moharil, Mangesh P., Dudhare, Mahendra S., Deshmukh, Amit G., Mane, Shyamsundar S., Nandanwar, Ravindra S., Penna, Suprasanna, Manjaya, Joy G., Iquebal, Mir Asif, Tomar, Rukam Singh, Rai, Anil,Kumar, Dinesh (2018). Transcriptomic signature reveals mechanism of flower bud distortion in witches’-broom disease of soybean (Glycine max). BMC Plant Biology iconpdf

  • Arora, Vasu, Kapoor, Neera, Fatma, Samar, Jaiswal, Sarika, Iquebal, Mir Asif, Rai, Anil and Kumar, Dinesh (2018). BanSatDB: Whole genome based database of putative and experimentally validated microsatellite markers of three Musa spp. Crop Journal.iconpdf

  • Jaiswal, Sarika, Antala, Tushar J., Kheni, Jashminkumar, Chopra, Meenu, Mandavia, M. K., Tomar, Rukam S., Jasrotia, Rahul Singh, Iquebal, M.A., Angadi, U.B., Rai, Anil, Kumar, Dinesh (2017) Transcriptomic signature of drought response in pearl millet (Pennisetum glaucum (L.) and development of web-genomic resources. Nature Scientific Reports: iconpdf

  • Jaiswal, Sarika, Sheoran, Sonia, Arora, Vasu, Angadi, U.B., Iquebal, M.A., Raghav, Nishu, Aneja, Bharti, Kumar Deepender, Khokar, R.S., Sharma, Pradeep, Singh, G.P., Rai, Anil, Tiwari, Ratan, Kumar, Dinesh. (2017). Putative Microsatellite DNA Marker-Based Wheat Genomic Resource for Varietal Improvement and Management. Frontiers in Plant Sciences. iconpdf

  • Tandon, G., Singh, S., Kaur, S., Sarika, Iquebal, M.A., Rai, A., Kumar, D. (2017). In silico identification of the genes related to biotic stresses in Solanum lycopersicum. Genomics Data.14, 82-90.

  • Choudhary, Pooja, Malhotra, Suruchi, Bharadwaj, C, Gaikwad, Kishor, Kaur, Sukhdeep, Chopra, Meenu, Tandon, Gitanjali, Jaiswal, Sarika,Iquebal, Mir A, Rai, Anil, Kumar, Dinesh, Srinivasan, Jain, Pradeep K. (2017). Transcriptomic signature of fusarium toxin in chickpea unveiling wilt pathways and marker discovery. Physiological and Molecular Plant Pathology , 100, 163-177.

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  • Iquebal, Mir A., Tomar, Rukam Singh, Parakhia, M.V., Singla, Deepak, Jaiswal, Sarika, Rathod, V.M., Padhiyar, S.M., Kumar, Neeraj, Rai, Anil, and Kumar, Dinesh. (2017) Draft whole genome sequence of groundnut stem rot fungus Athelia rolfsii revealing genetic architect of its pathogenicity and virulence. Nature Scientific Reports, Scientific Reports 7, Article number: 5299 doi:10.1038/s41598-017-05478-8 iconpdf

  • Iquebal, Mir Asif,Soren,Khela Ram, Gangwar, Priyanka, Shanmugavadevel, P S, Aravind K, Singla, Deepak, Jaiswal,Jasrotia, Rahul Singh, Sarika, Chaturvedi, Sushil K, Singh, NP, Varshney, Rajeev K, Rai, Anil, Kumar, Dinesh (2017).Discovery of herbicide resistance genes and its regulatory network in chickpea using transcriptome sequencing. Frontiers in Plant Sciences, 8:958. doi: 10.3389/fpls.2017.00958.iconpdf

  • Sharma, Pradeep, Tiwari, Ratan, Saharan, M.S., Sharma, Indu, Kumar, Jitender, Mishra, Shefali, Muthusamy, Senthilkumar K., Gupta, R.K., Jaiswal, Sarika, Iquebal, Mir Asif, Angadi, U.B., Kumar, Neeraj, Fatma, Samar, Rai, Anil, Kumar, Dinesh (2016) Draft Genome Sequence of the Karnal Bunt fungus, Tilletia indica Mitra: Two monosporidial lines (PSWKBGH-1 and 2). Genome Announcement 4(5):e00928-16. doi:10.1128/genomeA.00928-16.

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