Dr. Sarika
Dr. Sarika
Principal Scientist
sarika@icar.gov.in, aijaiswal@gmail.com
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Citations and H index



Research Interest


  • Computational Biology and bioinformatics
  • Genomics
  • Genome wide association studies
  • Designs of experiments

Teaching


  • Computational Genomics
  • Comparative Genomics
  • RNA/Protein Structure prediction and Molecular Modeling
  • Computational Techniques of Transcriptomics And Metabolomics
  • Basic Statistical Methods in Agriculture

Important Projects


    Ongoing:


  • Explicating genomic insights of Indigenous equines breed population through Computational Genomics and Artificial Intelligence based approaches.

  • Mainstreaming rice landraces diversity in varietal development through genome wide association studies: A model for large-scale utilization of gene bank collections of rice (Project ERP Code: 1012315) - DBT Funded Project

  • Germplasm Characterization and Trait Discovery in Wheat using Genomics Approaches and its Integration for Improving Climate Resilience, Productivity and Nutritional quality (Project ERP Code: 1012316) - DBT Funded Project

  • Molecular markers for improving reproduction of cattle and buffaloes - Funded by Bill and Melinda Gates Foundation (BMGF)

  • Molecular characterization, development of molecular markers and metabolite analysis of Tree bean (Parkia roxburghii) landraces of North-East India [BT/PR24912/NER/95/904/2017] – DBT Funded Project

  • Development of web server for phenotype and genotype analysis for cattle breeding management (Collaboration with ICAR-Central Institute for Research on Cattle, Meerut)-Inter-Institutional Project


  • Completed:


  • An integrative transciptomics and DNA methylomics approach to understand the dynamic features of biotic stress responses associated with mastitis in buffalos (Collaboration with ICAR-Central Institute for Research on Buffalo, Hisar)- Funded by ICAR

  • Deciphering genetic variation in the carbohydrate metabolism of farmed rohu families (Collaboration with ICAR-Central Institute of Freshwater Aquaculture, Bhubaneshwar)- Funded by ICAR

  • Computational approach for genomic resource improvement and precision phenotyping of less explored yield traits in wheat (Collaboration with ICAR-Indian Institute of Wheat and Barley Research, Karnal)- Funded by ICAR

  • Computational and experimental biology approaches for delineation of selected secondary metabolyte pathways and antimicrobial peptides (AMPs) in major spices (Collaboration with ICAR-Indian Institute of Spices Research, Kohzikode, Kerala)- Funded by ICAR

  • Genomic data analysis to elucidate the regulatory network and candidate genes underlying cytoplasmic male sterility in pigeonpea (Collaboration with ICAR-Indian Institute of Pulses Research, Kanpur) - Funded by ICAR

  • Whole Genome sequencing and development of allied genomic research in two commercially important Fish - Labeo rohita and Clarias batrachus- DBT Funded Project (January 2014 to March 2018)

  • Genomic data analysis for identification of economically important markers and viral diagnostics in pulses (Collaboration with ICAR-Indian Institute of Pulses Research, Kanpur) - Funded by ICAR (June 2015 to September 2017)

  • Molecular and computational approach to delineate metabolic pathways for better carbohydrate utilization in Labeo spp. (Collaboration with ICAR-Central Institute of Freshwater Aquaculture, Bhubaneshwar)- Funded by ICAR (June 2015 to September 2017)

  • Computational approach for harnessing genome information and its integration with wheat phenome for efficient varietal development (Collaboration with ICAR-Indian Institute of Wheat and Barley Research, Karnal)- Funded by ICAR (June 2015 to September 2017)

  • Mining and validation of candidate gene markers and screening on antimicrobial peptides of black pepper and small cardamom (Collaboration with ICAR-Indian Institute of Spices Research, Kohzikode, Kerala)- Funded by ICAR (June 2015 to September 2017)

  • Establishment of National Agricultural Bioinformatics Grid in ICAR (April, 2013 to June 2014)-Funded By NAIP, ICAR

  • Analysis and determination of antimicrobial peptides: A machine learning approach (November 2011 to March 2014)-Institute Funded

  • Development of efficient estimation procedures for computation of compound growth rates in pulses (December 2008 to March 2011) -Institute Funded

  • Development of on-line information retrieval system for AICRP on Chickpea plant breeding trial data (June 2009 to March 2011) -Institute Funded

  • Modelling and forecasting of pulse production using auto regressive integrated moving average and artificial neural network methodology (December 2008 to March 2011) -Institute Funded

  • Improving the usability of buffalo spermatozoa by sperm surface remodeling and immune acceptance in female reproductive tract-Funded by NASF, ICAR, New Delhi

  • ICAR Network Project on Functional Genomics and Genetic Modification (Earlier ICAR-Network Project on Transgenic Crops)-Funded by ICAR

  • Genome and transcriptome sequencing of coriander (Coriandrum sativum) to reveal insight of its genomic architecture and breeding targets- Funded by GSBM.


Training Organised


  • Organized a 21 days CAFT training program on “Advanced Bioinformatics Techniques for Mapping and GWAS using NGS data” as Course coordinator during February 06-26, 2020 funded by Agricultural Education Division, ICAR, New Delhi-110012.

  • Jointly Organized training programme on “Hands-on Training on Molecular Biology and Computational Tools” at ICAR-Central Institute of Freshwater Aquaculture, Bhubaneshwar as training Coordinator during April 16-25, 2019

  • Organized 5 days Resource Generation Training Programme on “Bioinformatics Tools and Techniques for Genomic Data Analysis” during September 11-15, 2018 as Course Director.

  • Organized a 21 days CAFT training program on “Application of OMICS Tools and Techniques for Agricultural Germplasm Improvement” as Course coordinator during February 09-March 01, 2018 funded by Agricultural Education Division, ICAR, New Delhi-110012

  • Organized a 21 days CAFT training program on “Computational Approaches for Next Generation Sequencing (NGS) Data Analysis in Agriculture” as Co-Course coordinator during February 08-28, 2017 funded by Agricultural Education Division, ICAR, New Delhi-110012.

  • Organized 3 days Hindi Workshop "कृषि में जैवसूचना का उपयोग (Application of Bioinformatics in Agriculture)" during June 27-29, 2017 at ICAR-Indian Agricultural Statistics Research Institute, New Delhi. (Course coordinator: Dr. Sarika, Co-Course Coordinator: Dr. Mir Asif Iquebal)

  • Jointly Organized Hands-on Training Programme on “Computational Approaches for NGS Data Analysis and Genomic Selection” at ICAR-Indian Institute of Wheat and Barley Research, Karnal-132001 during October 13-18, 2016.

  • Jointly organized training programme on “Hands-on Training on Analysis of Biological data Using Computational tools” at ICAR-Central Institute of Freshwater Aquaculture, Bhubaneshwar as training Coordinator during July 5-14, 2016.


Copyright Received


Sl. No. Authors Title Year Copyright Registration Number / Country
1. Sarika, Vasu Arora, M.A. Iquebal, Anil Rai, and Dinesh Kumar PipeMicroDb: Pigeonpea Microsatellite Database http://webapp.cabgrid.res.in/pigeonpea/ 2018 SW-10687/2018 India
2. Pradeep Sharma, Sonia Sheoran, Bharti Aneja, Sarika Jaiswal, G.P. Singh, Anil Rai, Vasu Arora, Dinesh Kumar, M.A. Iquebal, U.B. Angadi, Nishu Raghav, R.S. Khokar, Deepender Kumar, Ratan Tiwari TaSSRDb: Triticum aestivum SSR Database http://webtom.cabgrid.res.in/wheatssr/ 2018 SW-11115/2018 India
3. M.A. Iquebal, Sarika, Vasu Arora, Nidhi Verma, Anil Rai and Dinesh Kumar TomSatDb: Tomato Microsatellite Database http://webapp.cabgrid.res.in/tomsatdb/ 2018 SW-10689/2018 India
4. Sarika Jaiswal, M.A. Iquebal, Vasu Arora, Sonia Sheoran, P. Sharma P, U.B. Angadi, R. Singh, R. Tiwari, G.P. Singh, A. Rai, Dinesh Kumar TamiRPred: Putative miRNA Discovery and its Target Identification tool for Wheat (Triticum aestivum L.) http://webtom.cabgrid.res.in/tamirpred/index.php 2018 SW-10685/2018 India
5. C.N. Mishra, Sarika Jaiswal, N. Kumar, V. Tiwari, U.B. Angadi, A. Gupta, D. Kumar, S. Sheoran, N. Raghava, D. Kumar, A. Rai, S. Paul, M.A Iquebal, G.P. Singh, P. Sharma, R. Singh, R. Tiwari VISTa: Variety Identification System for Triticum aestivum (Wheat) software http://webtom.cabgrid.res.in/vista/ 2018 SW-10795/2018 India
6. Sarika, Vasu Arora, Dinesh Kumar, Anil Rai, M.A. Iquebal Buffsatdb: Buffalo Microsatellite Database http://webapp.cabgrid.res.in/buffsatdb/ 2018 SW-10802/2018 India
7. Sarika, M.A. Iquebal, Vasu Arora, Anil Rai and Dinesh Kumar Antimicrobial Prediction server for cattle: http://webapp.cabgrid.res.in/amp/ 2018 SW-10688/2018 India
8. Sarika Jaiswal, Samar Fatma, Vasu Arora, M.A. Iquebal, S. Nandi, J.K. Sundaray, J. Jayasanker, Anil Rai, Dinesh Kumar Antimicrobial Prediction server for Fish http://webapp.cabgrid.res.in/fishamp/ 2018 SW-10838/2018 India
9. Sarika, Vasu Arora, M. A. Iquebal, Anil Rai, Dinesh Kumar GoSatDb: Goat Microsatellite Database http://webapp.cabgrid.res.in/goat/ 2019 SW-12452/2019 India
10. M. A. Iquebal, Sandeep Kumar Verma, Rahul Singh Jasrotia, Sarika, U. B. Angadi, Anil Rai, Dinesh Kumar CnTDB: Coconut Transcriptome Database http://webtom.cabgrid.res.in/cntdb/ 2019 SW-12454/2019 India
11. Anil Rai, Dinesh Kumar, Sarika, M. A. Iquebal, Vasu Arora BrassicaSatDb: Brassica Microsatellite Database http://webapp.cabgrid.res.in/brassica/ 2022 SW-15347/2022 India
12. Anil Rai, Dinesh Kumar, Sarika, M. A. Iquebal, Vasu Arora SmCarTDB: Small Cardamom Transcriptome database http://webtom.cabgrid.res.in/smtcrd/ 2022 SW-15348/2022 India
                                                                             Copyright Applied
1. Vasu Arora, Sarika, M. A. Iquebal, Neera Kapoor, Samar Fatma, Anil Rai, Dinesh Kumar BanSatDB: Banana Microsatellite Database with primer generation tool http://webtom.cabgrid.res.in/bansatdb 2019 5458/2019-CO/SW
2. M. A. Iquebal, Sarika, U. B. Angadi, Samar Fatma, Yasmin Fatima, Anil Rai, Dinesh Kumar, Abhishek Bohra, K.R. Soren, Mohd. Akram, N.P. Singh Levidb: Genomics of Virus in Legume Crops http://webtom.cabgrid.res.in/levidb/ 2019 5463/2019-CO/SW
3. Shantanu Shukla, M. A. Iquebal, Sarika, U. B. Angadi, Samar Fatma, Neeraj Kumar, Rahul Singh Jasrotia, Yasmin Fatima, Anil Rai, Dinesh Kumar OGR: The Onion Genomic Resource http://webtom.cabgrid.res.in/ogr/ 2019 5461/2019-CO/SW

Foreign Visit


  • IOWA State University, IOWA, Ames, USA: NAIP funded International training in Bioinformatics for three months (September 15 to December 15, 2013).

Awards and Honors


  • Individual Award: Selected as Member, National Academy of Sciences (India), Allahabad in Biological Sciences for the year 2020.

  • Individual Award: Received InSc Young Acheiver Award 2020 from Institute of Scholars (InSc), Registered under Ministry of Ministry of Micro, Small and Medium Enterprise (MSME), Government of India.

  • Individual Award: Received InSc Young Acheiver Award 2020 from Institute of Scholars (InSc), Registered under Ministry of Ministry of Micro, Small and Medium Enterprise (MSME), Government of India.

  • Individual Award: Received Associate, National Academy of Agricultural Sciences (NAAS), New Delhifrom January 01, 2019

  • Received National Academy of Agricultural Sciences Associate from 1st January 2019.

  • Working as Member, Editorial Board of Institute News Letter

  • Working as Executive Member, Indian Society of Agricultural Statistics

  • Working as Member Editorial Board of Computational Biology and Bioinformatics.

  • Member of the committee for selection of RA position in DBT funded project under Charimanship of Dr Tapan Kumar Mondal, PS, NRCPB on 29 Nov, 2018 at 10:00 at NRCPB, New Delhi

  • INDIVIDUAL AWARD: Received “SESR Computational Biologist 2017” from Society for Educational and Scientific Research.

  • INDIVIDUAL AWARD: Received “Young Scientist Award” by Samgra Vikas Welfare Society for achievement and accomplishment in the field of Agriculture & Allied Sciences.

  • Received DISTINGUISHED SCIENTIST AWARD of the Society for Bioinformatics and Biological Sciences, Allahabad in recognition of the outstanding scientific contribution in the field of Bioinformatics.

  • Received 3rd Prize for the research paper entitled In silico gene prediction and their promoter analysis for the genes related to biotic stress in tomato (Solanum lycopersicum) authored by G. Tandon, S. Jaiswal, M. A. Iquebal, S. Singh, A. Rai, D. Kumar at National Conference on Bioinformatics Panorama in Agriculture and Health (NCBPAH 2015) at SHIATS, Allahabad during October 5-6, 2015.

  • BEST PAPER AWARD: Tandon, G., Jaiswal, S., Iquebal, M.A., Singh, S., Kumar, S., Rai, A. and Kumar, D. (2015). In silico study of interaction of EDS1 and PAD4 proteins in tomato using molecular dynamics approach in Proteomics Session in International Symposium on New Perspectives in Modern Biotechnology organized by Society for Applied Biotechnology, at Puducherry during March, 23-25, 2015.

  • BEST PAPER AWARD: Kaur, S., Iquebal, M.A., Jaiswal, S., Singh, S., Rai, A., Kumar, D. (2015). In silico prediction and functional characterization of genes related to abiotic and biotic stresses in chickpea (Cicer arietinum) in Genomics Session in International Symposium on New Perspectives in Modern Biotechnology organized by Society for Applied Biotechnology, at Puducherry during March 23 – 25, 2015.

  • BEST POSTER AWARD: Awarded FIRST in poster presentation on topic entitled SBMDb: First whole genome based DNA microsatellite database of sugarbeet for bioenergy and industrial application by M.A. Iquebal, Sarika, U.B. Angadi, Vasu Arora, Gaurav Sablok, Sunil Kumar, Anil Rai and Dinesh Kumar in 2nd National Conference on Converging Technologies Beyond 2020 (2CTB-2020) held during November 28-29, 2014 at UIET, Kurukshetra University, Kurukshetra, Haryana.

  • Awarded 2nd Prize for Hindi Research Poster entitled “कृत्रिम न्यूरल नेटवर्क (Artificial Neural Network) कार्यप्रणाली आधारित डी.एन.ए. माइक्रोसैटेलाइट मार्कर (DNA Microsatellite Marker) द्वारा नस्ल पहचान विधि” by Sarika, Iquebal, M.A., Rai, Anil and Kumar, Dinesh presented during Hindi Pakhwada (September 01 to 16, 2013) at IASRI, New Delhi

  • First/ Best Research Paper Award in National Conference: The research paper “World’s first whole genome based microsatellite DNA marker database of Tomato: TomSatDB” authored by M. A. Iquebal, Sarika, Vasu Arora, Nidhi Verma, Anil Rai and Dinesh Kumar was awarded as First/Best paper in the National Conference on “NextGen Biotechnology: Amalgamating Science & Technology”, Department of Biotechnology Engineering, UIET, Kurukshetra University, Kurukshetra, Haryana during November 23-34, 2012

  • Faculty (Bioinformatics), Post Graduate School, Indian Agricultural Research Institute, New Delhi 110012

  • Member of Seminar Association

  • Member Secretary, Board of Studies (Bioinformatics)


Database Developed


Microsatellite Marker Database:


Transcriptome Database


Other Database


Webserver Developed


Important Publications


  • Limbalkar, Omkar Maharudra, Vasisth, Prashant, Singh, Guman, Jain, Priyanka, Singh, Rajendra, Sharma, Mohit, Dhanasekaran, Gokulan, Kumar, Manish, Meena, Mohan Lal, Iquebal M.A., Jaiswal, S. , Rao, Mahesh, Watts, Anshul, Bhattachraya, Ramcharan, Singh, Kunwar Harendra, Kumar, Dinesh, Singh, Naveen (2023) Dissection of QTLs conferring drought tolerance in B. carinata derived B. juncea introgression lines. BMC Plant Biology Genetics iconpdf

  • Sharma, N.K., Singh, P., Saha, B., Bhardwaj, A., Iquebal M.A., Pal, Y., Nayan, V., Jaiswal, S. , Giri, S.K., Legha, R.A., Bhattacharya, TK, Kumar, D., Rai, A. (2023) Genome wide copy number variations in Bhutia equine breed using SNP genotyping data. Indian Journal of Animal Sciences, 93(8):802-805 Genetics iconpdf

  • Das, J., Kumar, B., Saha, B., Jaiswal, S. , Iquebal M.A., Angadi, UB, Kumar, D. (2023) Genome-wide identification and characterization of tissue specific long non-coding RNAs and circular RNAs in Common carp (Cyprinus carpio L.). Frontiers in Genetics iconpdf

  • Joshi, B., Singh, S., Tiwari, G.J., Kumar, H., Boopathi, NM, Jaiswal, S. , Adhikari, D., Kumar, D., Sawant, S.V., Iquebal, M.A., Jena, S.N. (2023) Genome-wide association study (GWAS) of yield-related traits uncovers the novel genomic regions and candidate genes in Indian upland cotton (Gossypium hirsutm L.). Frontiers in Plant Science iconpdf

  • Das, P., Chandra, T., Negi, A., Jaiswal, S. , Iquebal, M.A., Rai, A. and Kumar, D. (2023) A comprehensive review on genomic resources in medicinally and industrially important major spices for future breeding programs: status, utility and challenges. Current Research in Food Science iconpdf

  • Chandra, T., Jaiswal, S. , Iquebal, M.A., Singh, R., Gautam, R.K., Rai, A., Anil, Kumar, D. (2023) Revitalizing miRNAs mediated beneficial agronomic traits improvement in rice. Plant Physiology and Biochemistry Journal. iconpdf

  • Bhardwaj, A., Tandon, G., Pal, Y., Sharma, N.K., Nayan, V., Soni, S., Iquebal, M. A., Jaiswal, S. , Legha, R.A., Legha, T., TR, Bhattacharya, T.K., Kumar, D., Rai, A., Tripathi, B.N. (2023) Genome-wide SNP based genomic diversity and runs of homozygosity for selection signatures in Equine breeds. MDPI Genes (ISSN: 2073-4425)iconpdf

  • Yadav, R., Jaiswal, S. , Singhal, T., Mahto, R.K., Verma, S.B., Yadav, R.K. and Kumar, R. (2023) Potentials of genotypes, morpho-physio-biochemical traits, and growing media on shelf life and future prospects of gene editing in tomatoes. Frontiers in Genome Editing. 5:1203485. doi: 10.3389/fgeed.2023.1203485 iconpdf

  • Garhwal, R., Sangwan, K., Mehra, R., Pal, Y., Nayan, V., Tiwari, M., Chauhan, M.M.S., Iquebal, M. A., Jaiswal, S. , Kumar, H., Bhardwaj, A. (2022) Comparative metabolomics analysis of Halari donkey colostrum and mature milk throughout lactation stages using 1H-Nuclear Magnetic Resonance. LWT- Food Science and Technology. iconpdf

  • Srivastav, M., Radadiya, N., Ramachandra, S., Jayswal, P., Singh, N., Singh, S., Mahato, A.K., Gupta, A., Devi, R., Subrayagowda, S.H., Kumar, G., Prakash, P., Singh, S., Sharma, N., Nagaraja, A., Kar, A., Gaur, S.R, Sethi, S., Tandon, G., Jaiswal, S. , Iquebal, M.A., Singh, R., Singh, S.K., Singh, N. K. (2023) Construction of high-density genetic linkage maps and identification of QTLs for fruit colour and firmness traits in F1 Amrapali x Sensation mango hybrids. Frontiers in Plant Science. iconpdf

  • Puneeth, P.V., Yadav, R.K., Lata, S., Iquebal, M.A., Tomar, B.S., Choudhary, H., Tomar, A., Sharma, P.K., Jaiswal, S. (2023) Development and validation of novel SSR markers using transcriptome data in okra (Abelmoschus esculentus L.)- A genetically orphan crop. Indian Journal of Genetics and Plant Breeding, 83(1): 95-102 iconpdf

  • Rasal, K.D., Dixit, S., Swain, P.P, Siriyappagouder, P., Kumar, R., Iquebal, M.A., Vasam, M., Debbarma, J., Jaiswal, S. , Angadi, U.B., Rai, A., Kumar, D., Sundaray, J.K. (2023) Identification of host-specific skin-mucus and gut microbiota in snakehead murrel (Channa striata) (Bloch, 1793) using metagenomics approach. Journal of Applied Biology & Biotechnology. 2023 (DOI: https://doi.org/10.7324/JABB.2023.11508 iconpdf

  • Singh, S. K., Singh, R., Singh, S.K., Iquebal, M.A., Jaiswal, S. , Rai, P.K.(2023) Prevalence of obesity in newly onset diabetes mellitus and its relationship with uric acid: an Indian cross-sectional study. International Journal of General Medicine, 2023:16: 1217-1226 iconpdf

  • Vinay N.D., Matsumura, H., Munshi, A.D., Ellur, R.K., Chinnusamy, V., Singh, A., Iquebal, M.A., Jaiswal, S. , Jat, G.S., Panigrahi, I., Gaikwad, A.B., Rao, A.R., Dey, S.S.under, Behera, T.K., (2023) Molecular mapping of genomic region and identification of possible candidate genes associated with gynoecious sex expression in bitter gourd. Frontiers in Plant Science iconpdf

  • Vasisth, P., Singh, N., Limbalkar, O.M., Sharma, M., Gokulan, D., Meena, Mohan Lal, Jain, P., Jaiswal, S. , Iquebal, M.A., Watts, A., Gaikwad, K.B., Singh, R. (2023) Deciphering Heterotic Genomic Segments in Brassica carinata A. Braun derived Brassica juncea (L.) Czern. Introgression Lines. MDPI Plants (ISSN: 2223-7747). iconpdf

  • Kumar, B., Saha, B., Jaiswal, S. , Angadi, U.B., Rai, A., Iquebal, M.A.* (2023) Genome wide identification and characterization of tissue specific non-coding RNAs in Black pepper (Piper nigrum L.) Frontiers in Plant Science iconpdf

  • Garhwal, R., Sangwan, K., Mehra, R., Pal, Y., Nayan, V., Iquebal, M.A., Jaiswal, S. , Kumar, H., Bhardwaj, A. (2022) Comparative metabolomics analysis of Halari donkey colostrum and mature milk throughout lactation stages using 1H-Nuclear Magnetic Resonance. Foods (ISSN: 2304-8158). iconpdf

  • Ahmad,B, Haque, Md. A., Iquebal, M.A., Jaiswal, S. , Angadi, U.B., Kumar, D., Rai, A. (2023) DeepAProt: Deep learning based abiotic stress protein sequence classification and identification tool in cereals. Frontiers in Plant Science iconpdf

  • Jaiswal, S. , Rasal, K. D., Chandra, T., Prabha, R., Iquebal, M. A., Rai, A., & Kumar, D. (2022). Proteomics in fish health and aquaculture productivity management: Status and future perspectives. Aquaculture, 739159. iconpdf

  • Singh, S. K., Singh, R., Singh, S.K., Iquebal, M.A., Jaiswal, S. , Rai, P.K. (2022) Prevalence and Predictors of Metabolic Syndrome and It’s Association with Vitamin D Deficiency in Patients with Newly Onset Type 2 Diabetes Mellitus: A Cross Sectional Study. International Journal of Medicine and Public Health, 12(4):1-6. iconpdf

  • Devi, S., Sharma, P., Kumar, B., Tusar, K., Jaiswal, S. , Boopalakrishnan, Kumari, K., Mandal, N. K., Iquebal, M.A., Gopalakrishnan G, Juneja, B., Ghoshal, C.,, Munshi, A. D., Dey, S. S. (2022) Identification of a major QTL, parth6.1 associated with parthenocarpic fruit development in slicing cucumber genotype, Pusa Parthenocarpic Cucumber-6. Frontiers in Plant Science iconpdf

  • Kumari, S., Wankhede, D. P., Murmu, S., Maurya, R., Jaiswal, S. , Rai, A., & Archak, S. (2022). Genome-Wide Identification and Characterization of Trihelix Gene Family in Asian and African Vigna Species. Agriculture, 12(12), 2172. iconpdf

  • Singh, S.K., Singh, R., Singh, S.K., Iquebal, M.A., Jaiswal, S. , Rai, P.K. (2022) Risk of progression to overt hypothyroidism in Indian patients with subclinical hypothyroidism: a prospective observational study. International Journal of Advances in Medicine, 9(12): 1183-1187. iconpdf

  • Navathe, S., Pandey, A.K., Chand, R., Mishra, V.K., Kumar, D., Jaiswal S. , Iquebal, M.A., Govindan, V., Joshi, A.K. (2022) New genomic regions for resistance to spot blotch and terminal heat in an interspecific population of Triticum aestivum and T. spelta. Plants iconpdf

  • Jaiswal, S. , Aneja, B., Jaisri J., Pandey, B., Chhokar, R.S., Gill, S.C., Ahlawat, O.P., Kumar, A., Angadi, U.B., Rai, A., Tiwari, R., Iquebal, M.A., Kumar, D. (2022) Unveiling wheat microbiome under varied agricultural field conditions. Microbiology Spectrum iconpdf

  • Dey, S.S., Sharma, P., Das M., Anilabha, Jaiswal, S. , Behera, T.K., Kumari, K., Boopalakrishnan, G., Iquebal, M.A., Bhattacharya, R.C., Rai, A., Kumar, D.(2022) Genome wide identification of lncRNAs and circRNAs having regulatory role in fruit shelf life in health crop cucumber (Cucumis sativus L.). Frontiers in Plant Science iconpdf

  • Jain, P., Singh, A., Iquebal, M.A., Jaiswal, S. , Kumar, Sundeep, Rai, A., Kumar, D.(2022) Genome-wide analysis and evolutionary perspective of cytokinin dehydrogenase gene family in wheat (Triticum aestivum L.). Frontiers in Genetics.iconpdf

  • Kumar, B., Kumar, A., Jaiswal, S. , Iquebal, M.A., Angadi, U.B., Tomar, R.S., Rai, A., Kumar, D. (2022) Genome-wide identification of long non-coding RNAs in pearlmillet (Pennisetum glaucum (L.)) genotype subjected to drought stress. MDPI Agronomy (2073-4395) iconpdf

  • Mandal, N.K., Kumari, K., Kundu, A., Arora, A., Bhowmick, P. K., Iquebal, M.A., Jaiswal S. , Behera, T.K., Munshi, A.D., Dey, S.S. (2022) Cross-talk between the cytokinin, auxin and gibberellin regulatory networks determining parthenocarpy in cucumber.iconpdf

  • Paul, S., Duhan, J.S., Jaiswal, S. , Angadi, U.B., Sharma, R., Raghav, N., Gupta, O.P., Sheoran, S., Sharma, P., Singh, R., Rai, A., Singh, G.P., Kumar, D., Iquebal, M.A., Tiwari, R. (2022) RNA-Seq analysis of developing grains of wheat to intrigue into the complex molecular mechanism of the heat stress response. Frontiers in Plant Science. iconpdf

  • Negi, A., Singh, K., Jaiswal, S. , George, J. K., Angadi, U.B., Iquebal, M.A., Umadevi P., Rai, A., Kumar, D. (2022) Rapid genome wide location specific polymorphic SSR markers in black pepper genotypes by GBS approach. Frontiers in Plant Science iconpdf

  • Iquebal, M.A., Jagannadham, J.,Jaiswal, S. , Prabha, R., Rai, Anil and Kumar, D. (2022). Potential use of microbial community genomes in various dimensions of agriculture productivity and its management: A review. Frontiers in Microbiology iconpdf

  • Singh, S., Singh, A., Singh, S., Iquebal, M.A., Jaiswal S. , Singh, R. (2022) Prevalence of hyperuricemia and the relationship between serum uric acid and hypertension in newly onset diabetic patients: A cross sectional Indian study. Diabetes, Metabolic Syndrome and Obesity: Targets and Therapy. iconpdf

  • Khan, A., Singh, K., Jaiswal S. , Raza, M., Jasrotia, R.S., Kumar, A., Gurjar, A.K.S, Kumari, J., Nayan, V., Iquebal, M.A., Angadi, U.B., Rai, A., Datta, T.K. and Kumar, D. (2022) Whole-Genome-Based Web Genomic Resource for Water Buffalo (Bubalus bubalis). Front. Genet. 13:809741. iconpdf

  • Dhillon, M. K., Jaba, J., Mishra, P., Iquebal, M.A., Jaiswal S. , Tanwar, A.K., Bharat kumar, N., Arora, N., Mishra, S.P., Prasad, G.S., Hasan, F., Rai, A., Kumar, D., and Sharma, H.C (2022) Whole genome sequencing of spotted stem borer, Chilo partellus reveals multiple genes encoding enzymes for detoxification of insecticides. Functional and Integrative Genomics. iconpdf

  • Singh, D., Kesharwani, A.K., Singh, K., Jaiswal S. , Iquebal, M.A., Geat, N., Avasthi, A.S. (2022) Whole genome sequence resource of Indian race 4 of Xanthomonas campestris pv. campestris, the causal agent of black rot disease of Brassica oleracea var. capitata L. Plant Disease.iconpdf

  • Mahanta, D.K., Jangra, S., Saini, P., Iquebal, M.A., Jaiswal S. , Baranwal, V.K., Kalia, V.K., Chander, S.C., Ghosh, A. (2022) Groundnut bud necrosis virus modulates the expression of membrane transport, endocytosis, and cellular integrity-associated genes to circulate and propagate in its vector, Thrips palmi. Frontiers in Microbiology. iconpdf

  • Nayan, V., Singh, K., Iquebal, M.A., Jaiswal S. , Bhardwaj, A., Singh, C., Bhatia, T., Kumar, S., Singh, R., Swaroop, M.N., Kumar, R., Phulia, S.K., Bharadwaj, A., Kumar, D., Datta, T.K., Rai, A. (2022) Genome-wide DNA methylation and its effect on gene expression during subclinical mastitis in water buffalo. Frontiers in Genetics iconpdf

  • Gaur, A., Jindal, Y., Tiwari, R., Kumar, D., Kaushik, D., Singh, J., Narwal, S., Jaiswal S. , Iquebal, M.A., Angadi, U.B., Singh, G., Rai, A., Singh, G.P., Sheoran, S. (2022) GWAS to identify novel QTNs for WSC accumulation in wheat peduncle under different water regimes. Frontiers in Plant Science. iconpdf

  • Kumara, P.N., Sharma, P.K., Munshi, A.D., Behera, T.K., Bhatia, R., Kumari, K., Singh, J., Bhattacharya, R.C., Jaiswal S. , Iquebal, M.A., Arora, A., Rai, A., Kumar, D., Dey, S.S. (2022). Fruit transcriptional profiling of the contrasting genotypes for shelf life reveals the key candidate genes and molecular pathways regulating post-harvest biology in cucumber. Genomics. iconpdf

  • Sheoran, S.,Jaiswal S. , Raghav, N., Sharma, R., Sabhyata, Gaur, A., Jaisri J., Tandon, G., Singh, S., Sharma, P., Singh, R., Iquebal, M.A., Angadi, U.B., Gupta, A., Singh, G., Singh, G.P., Rai, A., Kumar, D., Tiwari, R. (2022) Genome-Wide Association Study and Post-genome-Wide Association Study Analysis for Spike Fertility and Yield Related Traits in Bread Wheat. Frontiers in Plant Science. iconpdf

  • Iquebal, M.A., Mishra, P., Maurya, R., Jaiswal S. , Rai, A. and Kumar, D. (2021) Centenary of Soil and Air borne wheat Karnal bunt disease research: A Review. MDPI Biology, 10(11), 1152. | iconpdf

  • Iquebal, M.A., Passari, Ajit Kumar, Jaisri J, Ahmad, Farzana, Deka, Pubajyoti, Jaiswal S. , Rai, A., Kumar, D., Singh, B.P., (2021). Microbiome of Pukzing Cave in India shows high antimicrobial activity against plant and animal pathogens. Genomics.| iconpdf

  • Sarwalia, P., Raza, M., Soni, A., Dubey, P. , Kumar, R., Kumaresan, A., Onteru, S. K., Singh, K., Iquebal, M. A., Jaiswal, S., Pal, A., Kumar, D., Datta, T.K. (2021) Establishment of the repertoire for placentome associated microRNA and their appearance in blood plasma could identify early establishment of pregnancy in buffalo (Bubalus bubalis). Frontiers in Cell and Developmental Biology, iconpdf

  • Jaiswal S. , Jaisri J., Kumari, J., Iquebal, M.A., Gujjar, A.K.S., Nayan, V., Angadi, U.B., Kumar, S., Kumar, R., Datta, T.K., Rai, A., Kumar, D. (2021). Genome wide prediction, mapping and development of genomic resources of Mastitis associated genes in Buffalo. Frontiers in Veterinary Sciences. iconpdf

  • George, J.K., Shelvy, S., Fayad, M., Umadevi P, Angadi, U.B., Iquebal, M. A.,Jaiswal S. , Rai, A., Kumar, D. (2021). Denovo transcriptome sequencing assisted identification of terpene synthases from black pepper (Piper nigrum) berry. Physiology and Molecular Biology of Plantsiconpdf

  • Jaiswal S. , Nandi S, Iquebal M.A, et al. Revelation of candidate genes and molecular mechanism of reproductive seasonality in carp fish (Labeo rohita Ham) by RNA sequencing. Research Square; 2020. iconpdf

  • George, J.K., Shelvy, S., Fayad, A.M., Angadi, U.B.,. Iquebal, M.A.,Jaiswal S. , Rai, A., Kumar, D. De novo transcriptome sequencing assisted identification of terpene synthases from black pepper (Piper nigrum) berry. Physiol Mol Biol Plants (2021). iconpdf

  • Samal, P., Molla, K.A., Bal, A., Ray, Soham, S., Harekrushna, K., A., Sahoo, P., Behera, M., Jaiswal S. , Iquebal, M.A., Chakraborti, M.l., Behera, L., Kar, M., K., Mukherjee, A.K. (2021). Comparative transcriptome profiling reveals basis of differential sheath blight disease response in tolerant and susceptible rice genotypes. Protoplasma iconpdf

  • Iquebal, M.A., Jaiswal S. , Singh, B.P., Prabha, R., Jasrotia, R.S., Angadi, U.B., Singh, D.P., Gupta, V., Rai, A. and Kumar, D. (2021). Fungal genomic resources for strain identification and diversity analysis of 1900 fungal species. Journal of Fungi. iconpdf

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  • Negi A, George Kokkat J, Jasrotia R.S., Madhavan S., Jaiswal S. , Angadi U.B., Iquebal M.A., Kalathil Palliyarakkal M., Palaniyandi U., Rai A., Kumar D. Drought responsiveness in black pepper (Piper nigrum L.): Genes associated and development of a web-genomic resource. Physiol Plant. iconpdf

  • Rasal, Kiran D., Iquebal, Mir Asif, Dixit, Sangita, Vasam, Manohar, Jaiswal, Sarika, Sahoo, Lakshman, Jagannadham,Jaisri,Nandi, Samiran,Mahapatra, Kanta Das, Rasal, Avinash, Udit, Uday Kumar, Meher, Prem Kumar, Murmu, Khuntia, Angadi, UB, Rai, Anil, Sundaray, Jitendra Kumar and Kumar, Dinesh (2020). Revealing global transcriptional plasticity and modulation in metabolic pathways in liver of genetically improved carp, Jayantirohu, Labeorohita fed with high carbohydrate regime. International Journal of Molecular Sciences. iconpdf

  • Anjum Arfa, Jaggi Seema, Varghese Eldho, Lal Shwetank, Rai Anil, Bhowmik Arpan, Mishra Dwijesh Chandra, Sarika (2020). Mixture distribution approach for identifying differentially expressed genes in microarray data of Arabidopsis thaliana. Indian Journal of Agricultural Sciences 90 (10): 1975–9.

  • Kumar, D, Kumar, A, Chhokar, V, Gangwar, O.P., Bhardwaj,S.C, Sivasamy M, Prasad,Sai, Sheoran,S.V, Singh, Sonia, Sharma, Rajender, Iquebal ,M A, Jaiswal, S., Angadi, U.B., Singh,Gyanendra,Rai Anil,Singh, G.P.,Kumar, Dinesh,and Tiwari, Ratan (2020) Genome-wide association studies in diverse spring wheat panel for Stripe, Stem and Leaf rust resistance. Frontiers in Plant Science, 11, Article number 748.iconpdf

  • Sidharthan, V.K., Sevanthi, Amitha Mithra V., Jaiswal, S. and Baranwal, Virendra V.K., (2020). Robust virome profiling and whole genome reconstruction of viruses and viroids enabled by use of available mRNA and sRNA- seq datasets in grapevine (Vitisvinifera L.). Frontiers in Microbiology, 11, Article number 1232,iconpdf

  • Das, P., Joshi, C.G., Kushwaha, B., Kumar, D., Sahoo, L., Das, S.P., Bit, A., Shah, T.M., Hinsu, A.T., Patel, N., Patnaik, S., Agarwal, S., Pandey, M., Srivastava, S., Meher, P.K., Jayasankar, P, Koringa, P.G., Nagpure, N.S., Kumar, R., Singh, M., Iquebal, M.A., Jaiswal, S., Kumar, N., Raza, M., Mahapatra, K.D. and Jena, J.K. (2019). De novo assembly and genome-wide SNP discovery in rohu carp, Labeo rohita. Frontiers in Geneticsiconpdf

  • Deepender Kumar, Vinod Chhokar, Sonia Sheoran, Rajender Singh, Pradeep Sharma,Sarika Jaiswal, M. A. Iquebal, Akanksha Jaiswar, J. Jaisri, U. B. Angadi, Anil Rai, G. P. Singh, Dinesh Kumar, Ratan Tiwari, Characterization of genetic diversity and population structure in wheat using array based SNP markers, Mol Biol Rep (2019).iconpdf

  • Mir Asif Iquebal, Pradeep Sharma, Rahul Singh Jasrotia, Sarika Jaiswal, Amandeep Kaur, Monika Saroha, U. B. Angadi, Sonia Sheoran, Rajender Singh, G. P. Singh, Anil Rai, Ratan Tiwari & Dinesh Kumar. RNAseq analysis reveals drought-responsive molecular pathways with candidate genes and putative molecular markers in root tissue of wheat, Scientific Reports volume 9, Article number: 13917 (2019) iconpdf

  • Ali, Abid, Kumar, Rakesh, Iquebal, Mir Asif, Jaiswal, Sarika, Kumar, Dinesh and khan, Asad (2018). Role of conserved residues in catalytic activity of NDM-1: an approach of site directed mutagenesis and molecular dynamics. Physical Chemistry Chemical Physics-a Journal of Royal Society of Chemistry. iconpdf

  • Rasal, Kiran D., Iquebal, Mir Asif, Jaiswal, Sarika, Dixit, Sangita, Vasam, Manohar, Nandi, Samiran, Raza, Mustafa, Sahoo, Lakshman, Angadi, UB, Rai Anil, Kumar, Dinesh, and Sundaray, Jitendra Kumar Sundaray (2019). Liver specific microRNAs identification in farmed carp, Labeo bata (Hamilton, 1822) fed with starch diet using high-throughput sequencing. Marine Biotechnology iconpdf

  • Rasal, Kiran D., Iquebal, Mir Asif, Pandey, Amrendra, Behera, Parmeswari, Jaiswal, Sarika, Vasam, Manohar, Dixti, Sangita, Raza, Mustafa, Sahoo, L., Nandi, Samiran, Angadi, UB, Rai Anil, Kumar, Dinesh Nagpure, Naresh, Chaudhari, Aparna and Sundaray, Jitendra Kumar (2019) Revealing liver specific microRNAs linked with carbohydrate metabolism of farmed carp, Labeo rohita (Hamilton, 1822). Genomics. iconpdf

  • Jasrotia, Rahul Singh, Yadav, Pramod Kumar, Iquebal, Mir Asif, Bhatt, S.B., Arora, Vasu,Angadi, U.B., Tomar Rukam Singh, Jaiswal, Sarika, Rai, Anil, Kumar, Dinesh (2019). VigSatDB: Genome wide microsatellite DNA marker database of three species of Vigna for germplasm characterization and improvement. Database: The Journal of Biological Databases and Curation.iconpdf

  • Sheoran, Sonia, Jaiswal Sarika, Kumar, Deepender, Raghav, Nishu, Sharma, Ruchika, Pawar, Sushma, Paul, Surinder, Iquebal, M.A., Jaiswar, Akanksha, Sharma, Pradeep, Singh, Rajender, Singh, CB Gupta, Arun, Kumar, Neeraj, Angadi, U.B., Rai, Anil, Singh, G.P., Kumar, Dinesh, Tiwari, Ratan (2018). Uncovering genomic regions associated with 36 agro-morphological traits in Indian spring wheat using GWAS. Frontiers in Plant Science.iconpdf

  • Jaiswal, Sarika, Iquebal, M.A., Arora, Vasu, Angadi, U.B., Khokar, R.S., Sharma, Pradeep, Sheoran, Sonia, Singh, G.P., Rai, Anil, Kumar, Tiwari, Ratan, Dinesh (2019). Development of species specific putative miRNA and its target prediction tool in wheat (Triticum aestivum L.). Scientific Reports, DOI : 10.1038/s41598-019-40333-y iconpdf

  • Singh, Rajender, Iquebal, MA, Mishra, CN, Jaiswal, Sarika, Kumar, Deepender, Raghav, Nishu, Paul, Surinder, Sheoran, Sonia, Sharma, Pradeep, Gupta, Arun, Tiwari, Vinod, Angadi, UB, Kumar, Neeraj, Rai, Anil, Singh, GP, Kumar, Dinesh and Tiwari, Ratan (2019) Development of model web-server for crop variety identification using throughput SNP genotyping data. Scientific Reports (Nature Group of Journal). iconpdf

  • Mukherjee, Sabyasachi, Mukherjee, Anupama, Singh, Rahul Jasrotia, Jaiswal, Sarika, Iquebal, Mir Asif, Longkumer, Imsusosang, Mech, Moonmoon, Vupru, Kezhavituo, Khate, Kobu, Rajkhowa, Chandan, Mitra, Abhijit, Rai, Anil and Kumar, Dinesh (2019). Muscle transcriptome signature and gene regulatory network in two divergent lines of a semi-domesticated bovine Mithun (Bos frontalis). Genomics (Elsevier Journal) iconpdf

  • Jaiswal, Sarika, Jadhav, Pravin V., Jasrotia, Rahul Singh, Kale, Prashant B., Kad, Snehal K., Moharil, Mangesh P., Dudhare, Mahendra S., Deshmukh, Amit G., Mane, Shyamsundar S., Nandanwar, Ravindra S., Penna, Suprasanna, Manjaya, Joy G., Iquebal, Mir Asif, Tomar, Rukam Singh, Rai, Anil,Kumar, Dinesh (2018). Transcriptomic signature reveals mechanism of flower bud distortion in witches’-broom disease of soybean (Glycine max). BMC Plant Biology iconpdf

  • Das, Ritwika, Arora, Vasu, Jaiswal, Sarika, Iquebal, MA, Angadi, UB, Singh, Rakesh, Shil, Sandip, Rai, Anil and Kumar Dinesh (2018). PolyMorphPredict: Web server for rapid polymorphic SSR locus discovery from whole genome and transcriptome data. Frontiers in Plant Sciences.

  • Arora, Vasu, Kapoor, Neera, Fatma, Samar, Jaiswal, Sarika, Iquebal, Mir Asif, Rai, Anil and Kumar, Dinesh (2018). BanSatDB: Whole genome based database of putative and experimentally validated microsatellite markers of three Musa spp. Crop Journal.iconpdf

  • Jaiswal, Sarika, Antala, Tushar J., Kheni, Jashminkumar, Chopra, Meenu, Mandavia, M. K., Tomar, Rukam S., Jasrotia, Rahul Singh, Iquebal, M.A., Angadi, U.B., Rai, Anil,Kumar, Dinesh (2017) Transcriptomic signature of drought response in pearl millet (Pennisetum glaucum (L.) and development of web-genomic resources. Nature Scientific Reports: iconpdf

  • Jaiswal, Sarika, Sheoran, Sonia, Arora, Vasu, Angadi, U.B., Iquebal, M.A., Raghav, Nishu, Aneja, Bharti, Kumar Deepender, Khokar, R.S., Sharma, Pradeep, Singh, G.P., Rai, Anil, Tiwari, Ratan, Kumar, Dinesh. (2017). Putative Microsatellite DNA Marker-Based Wheat Genomic Resource for Varietal Improvement and Management. Frontiers in Plant Sciences.iconpdf

  • Iquebal, Mir Asif, Soren, Khela Ram, Gangwar, Priyanka, Shanmugavadevel, P S, Aravind K, Singla, Deepak, Jaiswal, Jasrotia, Rahul Singh, Sarika, Chaturvedi, Sushil K, Singh, NP, Varshney, Rajeev K, Rai, Anil, Kumar, Dinesh (2017). Discovery of herbicide resistance genes and its regulatory network in chickpea using transcriptome sequencing. Frontiers in Plant Science, 8:958. doi: 10.3389/fpls.2017.00958.iconpdf

  • Verma, Sandeep Kumar, Jasrotia, Rahul Singh, Iquebal, M.A., Jaiswal, Sarika, Angadi, U.B., Rai, Anil and Kumar, Dinesh (2017). Deciphering genes associated with root wilt disease of coconut and development of its transcriptomic database (CnTDB). Physiological and Molecular Plant Pathology. 100, 255-267. iconpdf

  • Tandon, G., Singh, S., Kaur, S., Sarika, Iquebal, M.A., Rai, A., Kumar, D. (2017). In silico identification of the genes related to biotic stresses in Solanum lycopersicum. Genomics Data.14, 82-90.

  • Choudhary, Pooja, Malhotra, Suruchi, Bharadwaj, C, Gaikwad, Kishor, Kaur, Sukhdeep, Chopra, Meenu, Tandon, Gitanjali, Jaiswal, Sarika,Iquebal, Mir A, Rai, Anil, Kumar, Dinesh, Srinivasan, Jain, Pradeep K. (2017). Transcriptomic signature of fusarium toxin in chickpea unveiling wilt pathways and marker discovery. Physiological and Molecular Plant Pathology , 100, 163-177.

  • Iquebal, Mir A,Jaiswal, Sarika, Mahato, Ajay K, Jayaswal, Pawan K, Angadi, U.B., Kumar, Neeraj, Sharma, Nimisha, Singh, Anand, Srivastav, Manish, Praksh, Jai, Singh, Sanjay K, Khan, Kasim, Mishra, Rupesh K, Rajan, Shailendra, Bajpai, Anju, Sandhya, BS, Nischita, Puttaraju, Ravishankar, KV, Dinesh, MR, Rai, Anil, Kumar, Dinesh, Sharma, Tilak R., Singh, Nagendra K. (2017). MiSNPDb: a web based genomic resources of tropical ecology fruit mango (Mangifera indica L.) for phylogeography and varietal differentiation. Nature Scientific Reports 7, Article number: 14968(2017) iconpdf

  • Rahul Singh Jasrotia, Mir Asif Iquebal, Pramod Kumar Yadav, Neeraj Kumar, Sarika Jaiswal ,U.B. Angadi, Anil Rai, Dinesh Kumar Development of transcriptome based web genomic resources of yellow mosaic disease in Vigna mungo. Physiology and Molecular Biology of Plants (2017). iconpdf

  • Iquebal, Mir A., Tomar, Rukam Singh, Parakhia, M.V., Singla, Deepak, Jaiswal, Sarika, Rathod, V.M., Padhiyar, S.M., Kumar, Neeraj, Rai, Anil, and Kumar, Dinesh. (2017) Draft whole genome sequence of groundnut stem rot fungus Athelia rolfsii revealing genetic architect of its pathogenicity and virulence. Nature Scientific Reports, Scientific Reports 7, Article number: 5299 doi:10.1038/s41598-017-05478-8 iconpdf

  • Sharma, Soumya, Jaiswal, Sarika, Archak, Sunil (2017). Annotation of gene sequence and protein structure of brinjal EDS1. Bioinformation, 13(3), 54-59.

  • Gautam, A, Sharma, A, Sarika, Fatima, S, Arora, V, Iquebal, MA, Nandi, S, Sundaray, JK, Jayasanker, J, Rai, A, Kumar, D (2016). Development of antimicrobial peptide prediction tool for aquaculture industries. Probiotics

  • Shukla, S, Iquebal, MA, Jaiswal, Sarika, Angadi, UB, Fatma, Samar, Kumar, Neeraj, Jasrotia, Rahul S, Fatima, Yasmin, Rai, Anil, Kumar, Dinesh (2016) The Onion Genomic Resource: A Genomics and Bioinformatics driven resource for onion breeding. Plant Gene, 8, 9-15.

  • Shinde, M.P., Upadhyay, A., Sarika, Iquebal,M.A. and Upadhyay, A. K. (2016). Identification,characterization and expression analysis of ERF transcription factor VviERF073 and standardization of stable reference genes under salt stress in grape. Vitis-Journal of Grapevine Research, 55, 165-171.

  • Iquebal, MA, Prajneshu, Sarika (2016). Application of data reduction technique in agriculture: A functional approach. International Journal of Agricultural and Statistical Sciences, 12(S1), 209-213

  • Sharma, Pradeep, Tiwari, Ratan, Saharan, M.S., Sharma, Indu, Kumar, Jitender, Mishra, Shefali, Muthusamy, Senthilkumar K., Gupta, R.K., Jaiswal, Sarika, Iquebal, Mir Asif, Angadi, U.B., Kumar, Neeraj, Fatma, Samar, Rai, Anil, Kumar, Dinesh (2016) Draft Genome Sequence of the Karnal Bunt fungus, Tilletia indica Mitra: Two monosporidial lines (PSWKBGH-1 and 2). Genome Announcement 4(5):e00928-16. doi:10.1128/genomeA.00928-16. .

  • Kaur, Sukhdeep, Iquebal, M.A., Jaiswal, Sarika, Tandon, Gitanjali, Sundaram, R.M., Gautam, R.K., Suresh, K.P., Rai Anil and Kumar Dinesh (2016). A meta-analysis of potential candidate genes associated with salinity stress tolerance in rice. Agrigene 1, 126-134. .

  • Shukla, Shantanu Shukla, Iquebal, MA, Jaiswal, Sarika, Angadi, UB, Fatma, Samar, Kumar, Neeraj, Jasrotia, Rahul S, Fatima, Yasmin, Rai Anil, Kumar, Dinesh (2016) The Onion Genomic Resource: A Genomics and Bioinformatics driven resource for onion breeding. Plant Gene, 8: 9-15.

  • Jaiswal, Sarika, Dhanda, S.K., Iquebal, M.A., Arora, Vasu, Shah, Tejas M., Angadi, U.B., Joshi, Chaitanya G., Rahgava, G.P.S., Rai, Anil and Kumar, Dinesh (2016). BIS-CATTLE: A Web Server for Breed Identification using Microsatellite DNA Markers. American Journal of Bioinformatics. .

  • Iquebal, MA, Jaiswal, Sarika, Angadi, U.B., Sablok, Gaurav, Arora, Vasu, Kumar, Sunil, Rai, Anil and Kumar, Dinesh (2015). SBMDb: First whole genome microsatellite DNA marker database of sugar beet for bioenergy and industrial applications. Database: The Journal of Biological Databases and Curation.

  • Das, Sofia, Bit, Amrita, Patnaik, Siddhi, Sahoo, Lakshman, Meher, Prem, Saha, T., Patel, A., Patel, Namrata, Koringa, Prakash, Joshi, Chitanya, Agarwal, Suyash, Pandey, Manmohan, Srivastava, Shreya, Kushwaha, B., Kumar, Ravindra, Nagpure, Naresh, Iquebal, MA, Jaiswal, Sarika, Kumar, Dinesh, Jayasankar, P., Jena, J., and Das, Paramananda (2015). Low depth shotgun sequencing resolves complete mitochondrial genome sequence of Labeo rohita. Mitochondrial DNA. .

  • Kushwaha, B., Kumar, R., Agarwal, S., Pandey, M., Nagpure, N.S., Singh, M., Srivastava, S., Joshi, C.G., Das, P., Shah, T.M., Patel, A.B., Patel, N., Koringa, P, Das, S.P., Patnaik, S., Bit, A., Jaiswal, Sarika, Iquebal, MA, Kumar, D. and Jena, J.K. (2015). Assembly and variation analyses of C. batrachus mitogenome retrieved from WGS data and its phylogenetic relationship with other catfishes. Meta Gene, 5, 105-114. .

  • Jaiswal, Sarika, Iquebal, MA, Arora, Vasu, Rai, Anil and Kumar Dinesh. (2015). Species specific approach for development of web-based antimicrobial peptides prediction tool. Computer and Electronics in Agriculture, 111, 55-61. .

  • Iquebal, MA, Jaiswal, Sarika, and Rai, Anil (2015). Classification and identification of cattle antimicrobial peptides using Artificial Neural Network methodology. International Journal of Agricultural & Statistical Sciences, 10(S1), 275-281. .

  • Tandon Gitanjali, Jaiswal, Sarika, Iquebal M A, Kumar Sunil, Kaur Sukhdeep, Rai Anil and Kumar Dinesh. (2015). Evidence of Salicylic Acid pathway with EDS1 and PAD4 proteins by molecular dynamics simulation for Grape improvement. Journal of Biomolecular Structure and Dynamics.

  • Iquebal, M.A., Ansari, M. S., Jaiswal, Sarika,, Dixit,S. P., Verma, N. K., Aggarwal, R. A. K., Jayakumar,  S., Rai, A. and Kumar, D. (2014). Locus minimization in breed prediction using artificial neural network approach. Animal Genetics, 45(6), 898–902.

  • Iquebal, MA, Prajneshu, Jaiswal, Sarika,(2014). Nonlinear support vector regression methodology for modelling and prediction: An application. Journal of the Indian Society of Agricultural Statistics, 68 (3), 369-374.

  • Tandon Gitanjali, Jaiswal, Sarika,, Iquebal M A, Kumar Sunil, Kaur Sukhdeep Rai, Anil and Kumar Dinesh. (2014). Evidence of Salicylic Acid pathway with EDS1 and PAD4 proteins by molecular dynamics simulation for Grape improvement. Journal of Biomolecular Structure and Dynamics.

  • Kaur C., Pal, R.K., Kar A., Gadi C, Sen S, Kumar P, Chandra R, Jaiswal, Sarika, and Islam Khan. (2014). Characterization of Antioxidants and Hypoglycemic Potential of Pomegranate Grown in India - A Preliminary Investigation. Journal of Food Biochemistry (Accepted).

  • Iquebal, MA and Jaiswal, Sarika, (2013). Nonlinear growthmodels for describing country’s lentil (Lensculinaris M.) production. J. Food Legumes, 26(1&2): 79-82.

  • Iquebal, M.A., Jaiswal, Sarika, , Arora, Vasu, Verma, Nidhi, Rai, Anil and Kumar, Dinesh (2013). First whole genome based microsatellite DNA marker database of tomato for mapping and variety identification. BMC Plant Biology, 13, 197. iconpdf  iconpdf

  • Iquebal, M.A., Jaiswal, Sarika,, Dhanda, S.K., Arora, Vasu, Dixit, S.P., Raghava, G.P.S., Rai, A. and Kumar, D. (2013). Development of a model webserver for breed identification using microsatellite DNA marker. BMC Genetics, 14, 118. iconpdf  iconpdf

  • Jaiswal, Sarika,, Arora, Vasu, Iquebal, M.A., Rai, Anil, and Kumar, Dinesh (2013). PIPEMicroDB: Microsatellite database and primer generation tool for pigeonpea genome. Database: The Journal of Biological Databases and Curation, Vol. 2013, Article ID bas054, doi:10.1093/database/bas054.iconpdf

  • Bajetha, Garima, Bhati, Jyotika, Jaiswal, Sarika,, Iquebal, M. A., Rai, Anil, Arora, Vasu and Kumar, Dinesh (2013). Analysis and functional annotation of expressed sequence tags of Water Buffalo. Animal Biotechnology, 24(1), 25-30. iconpdf

  • Jaiswal, Sarika,, Arora, Vasu, Iquebal, M.A., Rai, Anil and Kumar, Dinesh (2013). In silico mining of putative microsatellite markers from whole genome sequence of water buffalo (Bubalis bubalis) and development of first BuffSatDB. BMC Genomics, 14, 43. iconpdf

  • Jaiswal, Sarika,, Iquebal, M. A. and Rai, Anil (2012). In silico analysis and homology model of legume antioxidant proteins. Online Journal of Bioinformatics, 13(1), 120-129.iconpdf

  • Jaiswal, Sarika,, Iquebal, M. A., Rai, A. (2012). Biotic stress resistance in agriculture through antimicrobial peptides. Peptides, 36, 322-330. iconpdf

  • Charanjit Kaur, Suresh Walia, Shweta Nagal, Shweta Walia, Jashbir Singh, Braj Bhusan Singh, Supradip Saha, Balraj Singh, Pritam Kalia, Seema Jaggi and Jaiswal, Sarika, (2012). Functional quality and antioxidant composition of selected tomato (Solanum lycopersicon L) cultivars grown in northern India. Food Science & Technology – Lebensmittel-Wissenschaft & Tech (In press) iconpdf

  • Sewak, Shiv, Iquebal, M. A., Singh, N. P, Solanki, R. K. and Jaiswal, Sarika, (2012). Genetic diversity studies in chickpea (Cicer arietinum) germplasm. Journal of Food Legumes, 25(1): 31-36. iconpdf

  • Eldho Varghese, Seema Jaggi and Jaiswal, Sarika, (2012). Response surface model with neighbour effects and correlated observation. Mod. Assisted Statist. Appli. (In Press)

  • Tanmay Kumar Koley, Charanjit Kaur, Shweta Nagal, Shweta Walia, Seema Jaggi, Jaiswal, Sarika, (2011). Antioxidant and phenolic content in genotypes of Indian jujube (Zizyphus mauritiana Lamk). Arabian Journal of Chemistry. iconpdf

  • Yadav, N. K., Jaiswal, Sarika,, Iquebal, M. A. and Akram, Mohd. (2011). In-silico analysis and homology modelling of coat protein of Mungbean yellow mosaic India virus. Journal of Food Legumes, 24(2): 138-141. iconpdf

  • Jaiswal, Sarika,, Iquebal, M. A. and Chattopadhyay, C. (2011). Modelling and forecasting of pigeonpea (Cajanus cajan) in India using Autoregressive integrated moving average methodology. Indian Journal of Agricultural Sciences, 81(6): 520-523. iconpdf

  • Jaggi, Seema, Jaiswal, Sarika, and Sharma, VK (2010). Response surface analysis incorporating neighbour effects from adjacent units. Ind. J. Agril. Sci., 80(8), 719-723.

  • Jaiswal, Sarika,, Jaggi, Seema and Sharma, VK (2009). Second order response surface model with neighbour effects. Comm. Statist.- Theory Methods, 38(9), 1393–1403.

  • Jaiswal, Sarika,, Jaggi Seema and Sharma, V. K. (2008). First Order Rotatable Designs Incorporating Neighbour effects. ARS Combinatorials (Accepted for publication).

  • Jaiswal, Sarika,, Wahi, SD and Rao, AR. (2006). On the robustness of estimate of genetic correlation. Ind. J. Anim. Sci., 76(9), 759-763.

  • Jaiswal, Sarika,, Wahi, SD and Rao, AR (2006) Effect of outliers on the estimates of genetic correlation. Ind. J. Anim. Genet. Breed, 27(1, 2), 17-21.


Book Chapters



  • Aski, M. S., Dikshit, H.K., Mishra, G. P., Singh, D., Yadav, P. S., Iquebal, M. A., Sarika, Gayacharan, U., Sripad (2021) Current and future strategies in breeding lentil for abiotic stresses. In book entitled "Legumes: Physiology and Molecular Biology of Abiotic Stress Tolerance". Editors: Prakash Muthu Arjuna Samy, Anandan Ramasamy, Viswanathan Chinnusamy, Springer Nature.


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