sarikasahu
Sarika Sahu
Scientist
sahusarikaiiita@gmail.com

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Citations and H index



Important Project


  • Creating a fully characterized genetic resource pipeline for mustard improvement programme in India.

Research Interest


  • Comparative genomics
  • Genome wide association
  • Epigenetics analysis: DNA methylation, non coding RNA miRNA, lncRNA, circRNA), and SNP.

Awards and honours


  • Gyan scholarship in NextGen Genomics, Biology, Bioinformatics and Technologies (NGBT) international conference in Mumbai, 30th September – 2nd October, 2019.
  • Secured 1st position in Oral presentation in International Conference on Climate Change, Biodiversity and Sustainable Agriculture AAU, Jorhat, Assam, 13th - 16th, December, 2018.
  • Gyan scholarship in NextGen Genomics, Biology, Bioinformatics and Technologies (NGBT) international conference in Jaipur, 30th September – 2nd October, 2018.
  • Best poster presentation at the International Conference on Statistics & Big data Bioinformatics in Agricultural Research – ICRISAT, Hyderabad, November 21st -23rd , 2016.
  • Scholarship through Ministry of Human Resource and Development(MHRD), Govt of India, During M.Tech degree
  • Qualified Graduate Aptitude Test in Engineering(GATE)-2013
  • Qualified Graduate Aptitude Test in Engineering(GATE)-2006

Publications


  • Tiwari,JK , Buckseth, T, Devi, S, Varshney, S, Sahu, S, Pati1, VU, Zinta, R, Ali, N, Moudgil, V, Singh, RK, Rawat, S, Dua, VK, Kumar, D, Kumar, M, Chakrabarti, SK, Rao, AR, and Rai, A. Physiological and genome-wide RNA-sequencing analyses identify candidate genes in a nitrogen-use efficient potato cv. Kufri Gaurav.Plant Physiology and Biochemistry.doi.org/10.1016/j.plaphy.2020.05.041iconpdf

  • Saxena, S, Sahu, S, Kaila, T, Nigam, D, Chaduvla, PK, Rao, AR, Sanand, S, Singh, NK, Gaikwad, K. Transcriptome profiling of differentially expressed genes in cytoplasmic male-sterile line and its fertility restorer line in pigeon pea (Cajanus cajan L.). BMC plant biology. 2020, 20(1):1-24.iconpdf

  • Dasmandal, T, Rao , AR ,and Sahu, S, 2020. Identification and characterization of circular RNAs regulating genes responsible for drought stress tolerance in chickpea and soybean.DOI: 10.31742/IJGPB.80.1.1iconpdf

  • Dasmandal, T, Rao, AR, and Sahu, S. Characterization of circular RNAs and their role in wilt stress tolerance in soybean. International Journal of Chemical Studies. 2020; 8(2): 16-30.iconpdf

  • Babu, K, KL, MR, Sahu, S, Mathur, RK, Kumar, N, Ravichandran, G, Anitha, P, Bhagya, HP. Development and validation of whole genome-wide and genic microsatellite markers in oil palm (Elaeis guineensis Jacq.): First microsatellite database (OpSatdb). Scientific reports. 2019;9(1):1899.iconpdf

  • Sahu, S, Rao, AR, Pandey, J, Gaikwad, K, Ghoshal, S, Mohapatra, T. Genome-wide identification and characterization of lncRNAs and miRNAs in cluster bean (Cyamopsis tetragonoloba). Gene. 2018 Aug 15;667:112-21.iconpdf

  • Dalal M, Sahu, S, Tiwari S, Rao AR, Gaikwad K. Transcriptome analysis reveals interplay between hormones, ROS metabolism and cell wall biosynthesis for drought-induced root growth in wheat. Plant Physiology and Biochemistry. 2018, 130:482-92.iconpdf

  • Purru S, Sahu, S, Rai S, Rao AR, Bhat KV. GinMicrosatDb: a genome-wide microsatellite markers database for sesame (Sesamum indicum L.). Physiology and molecular biology of plants. 2018, 24(5):929-37.iconpdf

  • Prajapat RK, Singh P, Tiwari P, Mainkar P, Sahu, S, Rao AR, Kansal R. In Silico Analysis and Molecular Docking Studies of Cajanus cajan Lectin against Aminopeptidase-N Receptor from Acyrthosiphon pisum. Int. J. Curr. Microbiol. App. Sci. 2018;7(6):959-67.iconpdf


  • Conference Presentations


  • Rekha Dixit,Soundhara Rajan G, Sahu, S,, Durg Vijay Rai In silico genome wide identification of abiotic stress responsive miRNAs in Taraxacum officinale”, International Conference on “Impact of Technological Tools on Food Security under Global Warming Scenario (ITTFS 2012), organized by Hi-Tech Horticulture Society, Meerut.
  • Jain, S, and Sahu, S, “Molecular characterization and phylogenetic analysis of Buffalo Granulocyte macrophage colony stimulating factor (GM-CSF)” in the National conference on Genomics: Tool for Bioprospecting organized by Department of Bioinformatics, Maulana Azad National Institute of Tcehnology, Bhopal, November 20th -21st , 2010
  • Jain, S. and Sahu, S, “Molecular characterization of Buffalo granulocyte macrophage colony stimulating factor (GM-CSF)” in the National conference on Genes and Genomics: Qualitative and Quantitative approach at Shobhit University Meerut, September 11th -12th, 2010
  • Pandey, J., Chauhan, N. and Sahu, S, “Data set of essential proteins for Neisseria meningitides Z2491 sero group A through comparative genome analysis” in the National conference on Genes and Genomics: Qualitative and Quantitative approach at Shobhit University Meerut, September 11th -12th, 2010
  • Ahmad, F., Chauhan, N., Kumar. S. and Sahu, S, “Potential drug target identification of Mycoplasma genetalium G-37” in the National conference on Emerging Trend in Advance Computing and Informatics, Shobhit University, Meerut, September 11th -12th, 2010.
  • Gupta, D., Sahu, S, and Bhatia, K.K. “Implementation of Bi-Directional Associative Memory for character recognition in Matlab” in the National conference on Emerging Trend in Advance Computing and Informatics, Shobhit University, Meerut, September 11th -12th, 2010
  • Sahu, S, Pratap, A., Srivastava, A., Pandey, A. and Dixit, R. “Pam Model of Regulatory Protectin (Cd59) Protein” in the National conference on Emerging Trend in Advance computing and Informatics, Shobhit University, Meerut, September 11th -12th, 2010.
  • Sahu, S, Shrimali, A., Gupta, A., and Kaushik, N. “In Silico Protein Structure Prediction of Enoyl Reductase of Haemophilus influenza” in the National conference on , Emerging Trend in Advance computing and Informatics, Shobhit University, Meerut, September 11th -12th, 2010
  • Dixit, R., Sahu, S,Sahu, S., Khanna, A., and Sharma, T.R., “Computational and structural analysis of defence related proteina accumulated during incompatible interaction in Oryza sativa-Magnaporthe oryzae pathosystem” in 3rd National conference on Lead for futuristic biotechnological inputs: Indian context, organized by department of Biotechnology and Microbiology, Institute of applied medicines & research, March 26th -27th, 2010.
  • Sahu, S, “Computational designing of novel drug against Aspergilus fumigatus which causes aspergellosis” in National Seminar on Scaling new zeniths in Biosciences Jointly organized by Departments of Botany, Biotechnology and Bioinformatics Hans Raj Mahila Maha Vidyalaya, Jalandhar, Punjab, India, November 26th, 2009
  • Presented poster entitled “In Silico structural analysis of ascorbate peroxidase in higher plants” at international Conference on Current Trends in Biotechnology and its implications in Agriculture & Technology, SVBPUA&T, Meerut, U.P., and India, February 19th -21st 2009.
  • Presented poster entitled “In Silico designing of novel triazole fungicides derivative as substitute for Resistant fungicides”SS at International conference on Human Genome Meeting, 13th HUGO-2008, Hyderabad, Andhra Pradesh, India. September 27th -30th, 2008

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